Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010457_P001 | Maize | cytosol | 38.89 | 44.09 |
| Zm00001d004819_P001 | Maize | mitochondrion | 42.36 | 21.4 |
| GSMUA_Achr5P27540_001 | Banana | cytosol | 35.42 | 17.59 |
| EER94809 | Sorghum | mitochondrion | 44.44 | 16.33 |
| Os03t0366700-01 | Rice | plastid | 40.97 | 14.94 |
| Zm00001d006931_P002 | Maize | plasma membrane | 40.28 | 14.57 |
| Zm00001d029266_P002 | Maize | mitochondrion | 46.53 | 14.16 |
| KRH71696 | Soybean | golgi | 36.81 | 13.59 |
| KRH36835 | Soybean | endoplasmic reticulum | 36.11 | 13.51 |
| CDX67655 | Canola | endoplasmic reticulum, golgi, mitochondrion | 37.5 | 13.4 |
| CDY51258 | Canola | endoplasmic reticulum, golgi, mitochondrion | 36.81 | 13.15 |
| Bra007268.1-P | Field mustard | golgi | 36.81 | 13.15 |
| Bra004601.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 35.42 | 12.91 |
| VIT_08s0040g01260.t01 | Wine grape | golgi | 35.42 | 12.81 |
| CDY27198 | Canola | endoplasmic reticulum, golgi, mitochondrion | 36.11 | 12.81 |
| CDX79955 | Canola | endoplasmic reticulum, golgi, mitochondrion | 35.42 | 12.75 |
| Solyc10g078400.1.1 | Tomato | golgi | 35.42 | 12.75 |
| CDY65073 | Canola | endoplasmic reticulum, golgi | 35.42 | 12.66 |
| PGSC0003DMT400021597 | Potato | golgi | 35.42 | 12.66 |
| CDY23872 | Canola | endoplasmic reticulum, golgi, mitochondrion | 34.72 | 12.53 |
| AT2G41150.2 | Thale cress | endoplasmic reticulum, golgi | 34.72 | 12.38 |
| AT3G56750.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 34.03 | 12.16 |
| Bra003250.1-P | Field mustard | golgi | 34.72 | 11.99 |
| GSMUA_Achr3P09270_001 | Banana | plasma membrane | 35.42 | 7.76 |
| Zm00001d022294_P002 | Maize | plastid | 7.64 | 6.55 |
| Zm00001d006021_P001 | Maize | cytosol | 2.78 | 6.06 |
| Zm00001d019764_P001 | Maize | golgi, mitochondrion | 17.36 | 5.48 |
| Zm00001d032819_P001 | Maize | plasma membrane | 22.92 | 5.18 |
| Zm00001d022247_P001 | Maize | plasma membrane | 19.44 | 4.82 |
Protein Annotations
| EnsemblPlants:Zm00001d016377_P001 | EnsemblPlants:Zm00001d016377_T001 | EnsemblPlantsGene:Zm00001d016377 | PANTHER:PTHR31469 | PANTHER:PTHR31469:SF12 | ProteinID:AQK70577.1 |
| UniParc:UPI00084239BF | UniProt:A0A1D6H714 | MapMan:35.2 | : | : | : |
Description
calcium ion binding
Coordinates
chr5:-:160010652..160014081
Molecular Weight (calculated)
16522.3 Da
IEP (calculated)
6.767
GRAVY (calculated)
-0.870
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDEGSSGPS LGPDREASSS PLQRPERVLS DPQKRAAYDQ YGKKGLKAFA DIQERCEAEW SLHPHLDRDT TPEYNRKRIA QWIPPGQTSF IALNERTPCF
101: FSTLSDRQQF RYKLAYSCNL SSMLEPIIKE NYQLLTVCKN EPAH
101: FSTLSDRQQF RYKLAYSCNL SSMLEPIIKE NYQLLTVCKN EPAH
001: MATMSKPHKL KATPGSQRLV LLCIVAVAFL LLFTSVISTG GLALPYRTTL IGYFVRSTRN KTQHSLSDKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSRMCIN PIHNKKGILN RSNNETREES WEVSSCAMES LYDIDLISEK IPVILDDSET WHIMLSTSMK LKERGSAHVY GANRHELNDS
201: SDFTNLLLIN RTASPLAWFV ECKDRGNRSD VMLPYSFLQT MAASRLRDAA EKIKAKLGDY DAIHVRRGDK LKTRKDRFRV ERSQFPHLDR DTRPEFIIGR
301: IQKQIPPGRT LFIGSNERTP DFFSPLAIRY KVAYSSNFSE ILDPIIENNY QLFMVERLIM MGAKTFFKTF REYETDLTLT DDPKKNKNWE IPVYTMDEGK
401: EAAS
101: LEEAMFLNRT FVMPSRMCIN PIHNKKGILN RSNNETREES WEVSSCAMES LYDIDLISEK IPVILDDSET WHIMLSTSMK LKERGSAHVY GANRHELNDS
201: SDFTNLLLIN RTASPLAWFV ECKDRGNRSD VMLPYSFLQT MAASRLRDAA EKIKAKLGDY DAIHVRRGDK LKTRKDRFRV ERSQFPHLDR DTRPEFIIGR
301: IQKQIPPGRT LFIGSNERTP DFFSPLAIRY KVAYSSNFSE ILDPIIENNY QLFMVERLIM MGAKTFFKTF REYETDLTLT DDPKKNKNWE IPVYTMDEGK
401: EAAS
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56750.1); Has 57 Blast hit /.../7 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). [Source:TAIR;Acc:AT2G41150]
SUBAcon: [endoplasmic reticulum,golgi]
SUBAcon: [endoplasmic reticulum,golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.