Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 2
- plasma membrane 2
- golgi 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007268.1-P | Field mustard | golgi | 98.52 | 99.26 |
| CDY65073 | Canola | endoplasmic reticulum, golgi | 96.31 | 97.02 |
| AT3G56750.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 88.67 | 89.33 |
| CDX67655 | Canola | endoplasmic reticulum, golgi, mitochondrion | 86.45 | 87.1 |
| CDY51258 | Canola | endoplasmic reticulum, golgi, mitochondrion | 86.21 | 86.85 |
| CDX79955 | Canola | endoplasmic reticulum, golgi, mitochondrion | 75.86 | 77.0 |
| CDY23872 | Canola | endoplasmic reticulum, golgi, mitochondrion | 75.62 | 76.94 |
| Zm00001d010457_P001 | Maize | cytosol | 21.92 | 70.08 |
| GSMUA_Achr5P27540_001 | Banana | cytosol | 48.03 | 67.24 |
| KRH36835 | Soybean | endoplasmic reticulum | 63.05 | 66.49 |
| KRH71696 | Soybean | golgi | 63.3 | 65.9 |
| VIT_08s0040g01260.t01 | Wine grape | golgi | 61.82 | 63.07 |
| TraesCS2A01G146500.1 | Wheat | endoplasmic reticulum | 46.55 | 62.79 |
| PGSC0003DMT400021597 | Potato | golgi | 61.33 | 61.79 |
| Solyc10g078400.1.1 | Tomato | golgi | 59.85 | 60.75 |
| EER94809 | Sorghum | mitochondrion | 56.65 | 58.67 |
| TraesCS2B01G171800.1 | Wheat | mitochondrion | 54.93 | 56.89 |
| TraesCS2D01G151100.1 | Wheat | mitochondrion | 54.93 | 56.89 |
| Os03t0366700-01 | Rice | plastid | 55.17 | 56.71 |
| Zm00001d006931_P002 | Maize | plasma membrane | 54.93 | 56.03 |
| EER97624 | Sorghum | mitochondrion | 54.19 | 55.28 |
| HORVU2Hr1G026040.3 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 54.43 | 54.98 |
| Zm00001d029266_P002 | Maize | mitochondrion | 56.16 | 48.2 |
| Zm00001d004819_P001 | Maize | mitochondrion | 29.31 | 41.75 |
| Zm00001d022294_P002 | Maize | plastid | 15.76 | 38.1 |
| GSMUA_Achr3P09270_001 | Banana | plasma membrane | 58.62 | 36.23 |
| Zm00001d016377_P001 | Maize | nucleus | 12.81 | 36.11 |
| CDY27873 | Canola | mitochondrion | 18.72 | 14.34 |
| CDX90695 | Canola | endoplasmic reticulum, golgi, plastid | 19.21 | 14.16 |
| CDY05025 | Canola | endoplasmic reticulum, golgi, plastid | 19.21 | 14.0 |
| CDY00855 | Canola | mitochondrion | 18.97 | 13.63 |
Protein Annotations
| EnsemblPlants:CDY27198 | EnsemblPlantsGene:GSBRNA2T00037070001 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0006004 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | GO:GO:0016757 | InterPro:GDP-Fuc_O-FucTrfase | PANTHER:PTHR31469 |
| PANTHER:PTHR31469:SF8 | PFAM:PF10250 | ProteinID:CDY27198 | ProteinID:CDY27198.1 | TMHMM:TMhelix | UniParc:UPI0004EE70A9 |
| UniProt:A0A078GRC5 | MapMan:35.2 | : | : | : | : |
Description
BnaA09g36040DBnaA09g36040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRC5]
Coordinates
chrLK032201:+:104652..106368
Molecular Weight (calculated)
46577.4 Da
IEP (calculated)
9.497
GRAVY (calculated)
-0.358
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MATMSKPQRT KPTSRSQRLV LLCIVIFASL LLLSSVISTG KLGLPYQQTL IDYFVRSSRG KREHTLSEKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTGEG WVGSSCAMDS LYDIDLISEK VPVILDDSKT WHLVLSTSMK LEERGIAHVY GVSRHRLTES
201: HYSNLLIINR TASPLAWYYL FVECKDRGNR SAVMLPYSFL PNMAAANLRD AAEKIKAQLG DYDAIHVRRG DKLKTRKDRF GVERIQFPHL DRDTRPEFIL
301: HRIEKLIPPG RTLYIGSNER TPGFFSPLAV RYKLAYSSNF SEVLDPIIKN NYQLFMVERL VMMGARIYFK TFREYETDLT LTDDPKKNKN WEIPVYTMDE
401: RKEAAS
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTGEG WVGSSCAMDS LYDIDLISEK VPVILDDSKT WHLVLSTSMK LEERGIAHVY GVSRHRLTES
201: HYSNLLIINR TASPLAWYYL FVECKDRGNR SAVMLPYSFL PNMAAANLRD AAEKIKAQLG DYDAIHVRRG DKLKTRKDRF GVERIQFPHL DRDTRPEFIL
301: HRIEKLIPPG RTLYIGSNER TPGFFSPLAV RYKLAYSSNF SEVLDPIIKN NYQLFMVERL VMMGARIYFK TFREYETDLT LTDDPKKNKN WEIPVYTMDE
401: RKEAAS
001: MATMSKAQRT KPTSGSQRLV LFCIVVFSFL LLFSSVISTG KLGLPYQQTL IDYFVWSPRG KRQHSLSEKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS
Arabidopsis Description
AT3g56750/T8M16_80 [Source:UniProtKB/TrEMBL;Acc:Q9LET2]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.