Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- golgi 4
- nucleus 1
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH71696 | Soybean | golgi | 76.13 | 77.69 |
KRH36835 | Soybean | endoplasmic reticulum | 74.87 | 77.4 |
GSMUA_Achr5P27540_001 | Banana | cytosol | 52.76 | 72.41 |
Zm00001d010457_P001 | Maize | cytosol | 22.36 | 70.08 |
Solyc10g078400.1.1 | Tomato | golgi | 69.85 | 69.5 |
PGSC0003DMT400021597 | Potato | golgi | 66.58 | 65.76 |
TraesCS2A01G146500.1 | Wheat | endoplasmic reticulum | 48.24 | 63.79 |
AT3G56750.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 63.82 | 63.03 |
Bra004601.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 62.31 | 62.78 |
CDY51258 | Canola | endoplasmic reticulum, golgi, mitochondrion | 63.57 | 62.78 |
Bra007268.1-P | Field mustard | golgi | 63.57 | 62.78 |
CDY65073 | Canola | endoplasmic reticulum, golgi | 63.57 | 62.78 |
CDX67655 | Canola | endoplasmic reticulum, golgi, mitochondrion | 63.32 | 62.53 |
CDX79955 | Canola | endoplasmic reticulum, golgi, mitochondrion | 62.31 | 62.0 |
CDY27198 | Canola | endoplasmic reticulum, golgi, mitochondrion | 63.07 | 61.82 |
CDY23872 | Canola | endoplasmic reticulum, golgi, mitochondrion | 61.56 | 61.4 |
AT2G41150.2 | Thale cress | endoplasmic reticulum, golgi | 61.56 | 60.64 |
EER94809 | Sorghum | mitochondrion | 59.55 | 60.46 |
Os03t0366700-01 | Rice | plastid | 59.55 | 60.0 |
TraesCS2B01G171800.1 | Wheat | mitochondrion | 58.54 | 59.44 |
TraesCS2D01G151100.1 | Wheat | mitochondrion | 58.29 | 59.18 |
EER97624 | Sorghum | mitochondrion | 58.04 | 58.04 |
Zm00001d006931_P002 | Maize | plasma membrane | 57.79 | 57.79 |
HORVU2Hr1G026040.3 | Barley | endoplasmic reticulum, golgi, mitochondrion, plastid | 58.04 | 57.46 |
Zm00001d029266_P002 | Maize | mitochondrion | 59.3 | 49.89 |
Bra003250.1-P | Field mustard | golgi | 50.0 | 47.72 |
Zm00001d022294_P002 | Maize | plastid | 18.84 | 44.64 |
Zm00001d004819_P001 | Maize | mitochondrion | 29.15 | 40.7 |
GSMUA_Achr3P09270_001 | Banana | plasma membrane | 65.58 | 39.73 |
Zm00001d016377_P001 | Maize | nucleus | 12.81 | 35.42 |
VIT_12s0057g01310.t01 | Wine grape | mitochondrion | 19.35 | 13.82 |
VIT_06s0004g00600.t01 | Wine grape | endoplasmic reticulum, plasma membrane, plastid | 18.59 | 13.26 |
Protein Annotations
EntrezGene:100251727 | wikigene:100251727 | MapMan:35.2 | ProteinID:CBI32783 | ProteinID:CBI32783.3 | UniProt:D7TQR3 |
EMBL:FN596008 | InterPro:GDP-Fuc_O-FucTrfase | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005975 | GO:GO:0006004 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016740 | GO:GO:0016757 | EntrezGene:LOC100251727 | wikigene:LOC100251727 |
PFAM:PF10250 | PANTHER:PTHR31469 | PANTHER:PTHR31469:SF8 | TMHMM:TMhelix | UniParc:UPI00015CAEA6 | ArrayExpress:VIT_08s0040g01260 |
EnsemblPlantsGene:VIT_08s0040g01260 | EnsemblPlants:VIT_08s0040g01260.t01 | unigene:Vvi.18673 | RefSeq:XP_002282555 | RefSeq:XP_002282555.1 | SEG:seg |
Description
No Description!
Coordinates
chr8:+:12303300..12310171
Molecular Weight (calculated)
45382.1 Da
IEP (calculated)
9.966
GRAVY (calculated)
-0.311
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MAIYKTLRTK PKPNRSPILF LVLSILAIAF LCILSSSISI NGSLFRSEKT QLNTLKSRHS VGHEKYLYWG YKIDCPGKHC DSCEGLGHQE SSLRCALEEA
101: LFLQRTLVMP SRMCINPIHN KKGILHHSSN ATSEEMWAAN SCAMDSLYDL DLMSNTVPVI LDNSKMWYRV LSTSMKLGAR GVAHVAGVSR IALRDNSHYS
201: NLLLINRTAS PLSWFMECKD RNNRSAIMLP YSFLPSMAAK KLRDAAGKIK VLLGDYDAMH VRRGDKIKTR KDRFGVDRTL HPHLDRDTRP EFILRRIEKW
301: VPPGRTLFIA SNERTPGFFS PLSARYRLAY SSNYSKILDP LVENNYQLFM IERLILMGAK TYIRTFKEDE TYLSLTDDPK KNTKAWQIPV YTSDGEGS
101: LFLQRTLVMP SRMCINPIHN KKGILHHSSN ATSEEMWAAN SCAMDSLYDL DLMSNTVPVI LDNSKMWYRV LSTSMKLGAR GVAHVAGVSR IALRDNSHYS
201: NLLLINRTAS PLSWFMECKD RNNRSAIMLP YSFLPSMAAK KLRDAAGKIK VLLGDYDAMH VRRGDKIKTR KDRFGVDRTL HPHLDRDTRP EFILRRIEKW
301: VPPGRTLFIA SNERTPGFFS PLSARYRLAY SSNYSKILDP LVENNYQLFM IERLILMGAK TYIRTFKEDE TYLSLTDDPK KNTKAWQIPV YTSDGEGS
001: MATMSKAQRT KPTSGSQRLV LFCIVVFSFL LLFSSVISTG KLGLPYQQTL IDYFVWSPRG KRQHSLSEKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS
Arabidopsis Description
AT3g56750/T8M16_80 [Source:UniProtKB/TrEMBL;Acc:Q9LET2]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.