Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010457_P001 | Maize | cytosol | 20.24 | 26.77 |
| GSMUA_Achr5P27540_001 | Banana | cytosol | 45.83 | 26.55 |
| Zm00001d006931_P002 | Maize | plasma membrane | 58.93 | 24.87 |
| KRH36835 | Soybean | endoplasmic reticulum | 45.24 | 19.74 |
| KRH71696 | Soybean | golgi | 45.24 | 19.49 |
| Solyc10g078400.1.1 | Tomato | golgi | 45.24 | 19.0 |
| VIT_08s0040g01260.t01 | Wine grape | golgi | 44.64 | 18.84 |
| Zm00001d004819_P001 | Maize | mitochondrion | 31.55 | 18.6 |
| PGSC0003DMT400021597 | Potato | golgi | 43.45 | 18.11 |
| Zm00001d029266_P002 | Maize | mitochondrion | 50.0 | 17.76 |
| Bra004601.1-P | Field mustard | endoplasmic reticulum, golgi, mitochondrion | 40.48 | 17.22 |
| CDY23872 | Canola | endoplasmic reticulum, golgi, mitochondrion | 40.48 | 17.04 |
| CDX79955 | Canola | endoplasmic reticulum, golgi, mitochondrion | 40.48 | 17.0 |
| CDX67655 | Canola | endoplasmic reticulum, golgi, mitochondrion | 39.88 | 16.63 |
| AT3G56750.1 | Thale cress | endoplasmic reticulum, golgi, plastid | 39.29 | 16.38 |
| CDY51258 | Canola | endoplasmic reticulum, golgi, mitochondrion | 39.29 | 16.38 |
| AT2G41150.2 | Thale cress | endoplasmic reticulum, golgi | 39.29 | 16.34 |
| CDY65073 | Canola | endoplasmic reticulum, golgi | 38.69 | 16.13 |
| Bra007268.1-P | Field mustard | golgi | 38.1 | 15.88 |
| CDY27198 | Canola | endoplasmic reticulum, golgi, mitochondrion | 38.1 | 15.76 |
| Bra003250.1-P | Field mustard | golgi | 30.36 | 12.23 |
| GSMUA_Achr3P09270_001 | Banana | plasma membrane | 42.26 | 10.81 |
| Zm00001d016377_P001 | Maize | nucleus | 6.55 | 7.64 |
| Zm00001d022247_P001 | Maize | plasma membrane | 17.26 | 4.99 |
| Zm00001d019764_P001 | Maize | golgi, mitochondrion | 12.5 | 4.61 |
| Zm00001d006021_P001 | Maize | cytosol | 1.79 | 4.55 |
| Zm00001d032819_P001 | Maize | plasma membrane | 16.07 | 4.24 |
Protein Annotations
| EnsemblPlants:Zm00001d022294_P002 | EnsemblPlants:Zm00001d022294_T002 | EnsemblPlantsGene:Zm00001d022294 | PANTHER:PTHR31469 | PANTHER:PTHR31469:SF12 | ProteinID:ONM60054.1 |
| SEG:seg | UniParc:UPI000842B56C | UniProt:A0A1D6IKX6 | MapMan:35.2 | : | : |
Description
calcium ion binding
Coordinates
chr7:+:174690084..174697253
Molecular Weight (calculated)
19275.1 Da
IEP (calculated)
9.824
GRAVY (calculated)
-0.574
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MPCKDVPQFS AQYQRGPSIK QCNFTTKIIS RSTKLGEDGL VVHVQGVSRA ELKQNANYPG AFLINRTASP LACLPFSASK FVCPPQMKEI IGDYDAIHVR
101: RGDKLKNRKD RLYLSIWYRL AHSSNFSSIL NPFVKTVKEF DKDLDLCDDP KKNTKDWQRQ EPVRFIHD
101: RGDKLKNRKD RLYLSIWYRL AHSSNFSSIL NPFVKTVKEF DKDLDLCDDP KKNTKDWQRQ EPVRFIHD
001: MATMSKAQRT KPTSGSQRLV LFCIVVFSFL LLFSSVISTG KLGLPYQQTL IDYFVWSPRG KRQHSLSEKY LYWGNRIDCP GKNCETCAGL GHQESSLRCA
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS
101: LEEAMFLNRT FVMPSGMCIN PIHNKKGILN RSDNKTTEEG WLGSSCAMDS LYDIDLISEK IPVILDDSKT WHIVLSTSMK LGERGIAHVS GVTRHRLKES
201: HYSNLLIINR TASPLAWFVE CKDRSNRSAV MLPYSFLPNM AAAKLRNAAE KIKAQLGDYD AIHVRRGDKL KTRKDRFGVE RIQFPHLDRD TRPEFILRRI
301: EKRIPRGRTL FIGSNERKPG FFSPLAVRYK LAYSSNFSEI LDPIIENNYQ LFMMERLVMM GAKTYFKTFK EYETDLTLTD DPKKNKNWEI PVYTMDERRE
401: EAS
Arabidopsis Description
AT3g56750/T8M16_80 [Source:UniProtKB/TrEMBL;Acc:Q9LET2]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
SUBAcon: [endoplasmic reticulum,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.