Factsheet for Bra019662.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
nucleus 2
mitochondrion 4
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra026839.1-P	Field mustard	mitochondrion	96.64	96.64
Bra016269.1-P	Field mustard	mitochondrion	87.39	87.39
Bra007877.1-P	Field mustard	mitochondrion	87.39	86.67
Bra016706.1-P	Field mustard	cytosol	98.32	63.93
GSMUA_Achr6P15860_001	Banana	mitochondrion	76.47	61.07
Bra003984.1-P	Field mustard	cytosol	89.92	58.15
CDY49095	Canola	mitochondrion	100.0	54.09
CDX84036	Canola	cytosol, mitochondrion	99.16	53.64
GSMUA_Achr6P08650_001	Banana	endoplasmic reticulum, extracellular	52.94	53.39
AT1G14320.1	Thale cress	mitochondrion	96.64	52.27
PGSC0003DMT400006183	Potato	cytosol	78.15	50.82
PGSC0003DMT400078129	Potato	cytosol, mitochondrion	76.47	41.55
TraesCS4A01G204800.1	Wheat	plastid	75.63	41.47
Solyc06g082670.2.1	Tomato	plastid	75.63	41.1
GSMUA_Achr10P...	Banana	cytosol	77.31	41.07
TraesCS4D01G105600.1	Wheat	cytosol, mitochondrion	74.79	41.01
TraesCS4B01G108400.1	Wheat	golgi, unclear	74.79	41.01
Zm00001d033128_P001	Maize	plasma membrane, plastid	75.63	40.91
EER93866	Sorghum	cytosol	75.63	40.91
GSMUA_Achr8P01550_001	Banana	cytosol, mitochondrion	77.31	40.89
TraesCS1A01G112500.1	Wheat	nucleus	74.79	40.64
TraesCS1B01G132700.1	Wheat	cytosol, mitochondrion	74.79	40.64
TraesCS1D01G114100.1	Wheat	cytosol, mitochondrion	74.79	40.64
Solyc06g007520.2.1	Tomato	nucleus, unclear	78.15	40.61
Os05t0169100-01	Rice	nucleus, plastid	72.27	39.27
EES06560	Sorghum	cytosol	73.11	38.84
Os11t0220800-01	Rice	nucleus	72.27	38.39
KRG98102	Soybean	mitochondrion, plastid	80.67	36.5
VIT_01s0150g00580.t01	Wine grape	endoplasmic reticulum	80.67	35.56
Solyc06g082650.2.1	Tomato	nucleus	55.46	32.04
HORVU1Hr1G024710.4	Barley	mitochondrion	68.91	32.03
HORVU4Hr1G016190.4	Barley	extracellular, golgi	53.78	31.84
VIT_06s0004g08260.t01	Wine grape	cytosol, mitochondrion	57.14	31.05
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	7.56	25.71

Protein Annotations

Gene3D:2.20.25.330	Gene3D:3.90.1170.10	MapMan:35.1	EnsemblPlantsGene:Bra019662	EnsemblPlants:Bra019662.1	EnsemblPlants:Bra019662.1-P
GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	InterPro:IPR036920	UniProt:M4DT19	PFAM:PF00252	ScanProsite:PS01257
PANTHER:PTHR11726	PANTHER:PTHR11726:SF22	InterPro:Ribosomal_L10e	InterPro:Ribosomal_L10e/L16	InterPro:Ribosomal_L10e/L16_sf	InterPro:Ribosomal_L10e_CS
SUPFAM:SSF54686	UniParc:UPI000253E6C5	:	:	:	:

Description

AT1G14320 (E=7e-064) SAC52 | SAC52 (SUPPRESSOR OF ACAULIS 52); structural constituent of ribosome

Coordinates

chrA06:+:5113745..5114271

Molecular Weight (calculated)

13144.2 Da

IEP (calculated)

11.611

GRAVY (calculated)

-0.255

Length

119 amino acids

Sequence
(BLAST)

001: MLSCAGADRL QTGMRGAFGK ALGTCARVAI GQVLLSVRCK DAHGHHAQEA LRRAKFKFPG RQKIIVSRKW GFTKFNRADF TKLRQEKRVV PDGVNAKFFS
101: CHGPLALRQP GTAFLPATY

Best Arabidopsis Sequence Match ( AT1G14320.1 )
(BLAST)

001: MGRRPARCYR QIKGKPYPKS RYCRGVPDPK IRIYDVGMKR KGVDEFPFCV HLVSWEKENV SSEALEAARI ACNKYMVKSA GKDAFHLRIR VHPFHVLRIN
101: KMLSCAGADR LQTGMRGAFG KALGTCARVA IGQVLLSVRC KDAHGHHAQE ALRRAKFKFP GRQKIIVSRK WGFTKFNRAD FTKLRQEKRV VPDGVNAKFL
201: SCHGPLANRQ PGSAFLPAHY

Arabidopsis Description

RPL10A60S ribosomal protein L10-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93VT9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.