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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • nucleus 2
  • cytosol 2
  • endoplasmic reticulum 1
  • mitochondrion 2
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr11P...

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G26910.1 GSMUA_Achr11P... AT1G71840.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol, mitochondrion 14.73 94.29
GSMUA_Achr6P15860_001 Banana mitochondrion 61.61 92.62
GSMUA_Achr8P01550_001 Banana cytosol, mitochondrion 92.41 92.0
Solyc06g082670.2.1 Tomato plastid 89.73 91.78
PGSC0003DMT400078129 Potato cytosol, mitochondrion 89.73 91.78
KRH64232 Soybean nucleus 91.07 91.48
KRH53698 Soybean cytosol 91.07 91.48
KRH72557 Soybean nucleus 90.62 91.44
KRH16949 Soybean nucleus 90.62 91.44
Zm00001d033128_P001 Maize plasma membrane, plastid 88.84 90.45
EER93866 Sorghum cytosol 88.84 90.45
PGSC0003DMT400006183 Potato cytosol 73.66 90.16
TraesCS1A01G112500.1 Wheat nucleus 87.05 89.04
TraesCS1B01G132700.1 Wheat cytosol, mitochondrion 87.05 89.04
TraesCS1D01G114100.1 Wheat cytosol, mitochondrion 87.05 89.04
EES06560 Sorghum cytosol 88.84 88.84
Os05t0169100-01 Rice nucleus, plastid 86.61 88.58
TraesCS4A01G204800.1 Wheat plastid 85.71 88.48
TraesCS4B01G108400.1 Wheat golgi, unclear 85.27 88.02
TraesCS4D01G105600.1 Wheat cytosol, mitochondrion 84.82 87.56
Solyc06g007520.2.1 Tomato nucleus, unclear 88.84 86.9
AT1G14320.1 Thale cress mitochondrion 84.38 85.91
CDX96861 Canola cytosol 84.38 85.91
CDX84036 Canola cytosol, mitochondrion 84.38 85.91
CDY49095 Canola mitochondrion 84.38 85.91
AT1G26910.1 Thale cress mitochondrion 84.38 85.52
CDY38756 Canola mitochondrion 83.93 85.45
Os11t0220800-01 Rice nucleus 85.27 85.27
CDY44087 Canola cytosol, mitochondrion 83.48 84.62
AT1G66580.1 Thale cress cytosol, mitochondrion 83.48 84.62
CDY28582 Canola cytosol, mitochondrion 83.48 84.62
CDY62060 Canola mitochondrion 83.48 84.62
CDX81630 Canola cytosol 68.75 84.15
Bra016706.1-P Field mustard cytosol 68.3 83.61
CDY48394 Canola cytosol 67.41 82.07
Bra003984.1-P Field mustard cytosol 67.41 82.07
Solyc06g082650.2.1 Tomato nucleus 74.11 80.58
Bra026839.1-P Field mustard mitochondrion 41.52 78.15
CDY39324 Canola cytosol, mitochondrion 84.38 77.78
VIT_06s0004g08260.t01 Wine grape cytosol, mitochondrion 75.89 77.63
Bra019662.1-P Field mustard mitochondrion 41.07 77.31
VIT_01s0150g00580.t01 Wine grape endoplasmic reticulum 92.41 76.67
HORVU4Hr1G016190.4 Barley extracellular, golgi 68.75 76.62
Bra016269.1-P Field mustard mitochondrion 40.62 76.47
KRG98102 Soybean mitochondrion, plastid 89.29 76.05
CDY33756 Canola cytosol 83.93 75.5
KRH66434 Soybean cytosol, mitochondrion, plastid 62.05 75.14
Bra007877.1-P Field mustard mitochondrion 40.18 75.0
KRH65844 Soybean cytosol 35.27 73.15
KRG88858 Soybean cytosol 60.71 73.12
HORVU1Hr1G024710.4 Barley mitochondrion 82.14 71.88
CDY01747 Canola mitochondrion 83.93 70.94
GSMUA_Achr6P08650_001 Banana endoplasmic reticulum, extracellular 35.71 67.8
Protein Annotations
MapMan:17.1.2.1.9Gene3D:2.20.25.330Gene3D:3.90.1170.10GO:GO:0003674GO:GO:0003735GO:GO:0005198
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005840GO:GO:0006412
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0019538EnsemblPlantsGene:GSMUA_Achr10G12900_001
EnsemblPlants:GSMUA_Achr10P12900_001EnsemblPlants:GSMUA_Achr10T12900_001InterPro:IPR036920UniProt:M0RHR6PFAM:PF00252PIRSF:PIRSF005590
ScanProsite:PS01257PANTHER:PTHR11726PANTHER:PTHR11726:SF22InterPro:Ribosomal_L10eInterPro:Ribosomal_L10e/L16InterPro:Ribosomal_L10e/L16_sf
InterPro:Ribosomal_L10e_CSSUPFAM:SSF54686TIGRFAMs:TIGR00279UniParc:UPI00029614F8::
Description
60S ribosomal protein L10 [Source:GMGC_GENE;Acc:GSMUA_Achr10G12900_001]
Coordinates
chr10:-:21769849..21773233
Molecular Weight (calculated)
25168.8 Da
IEP (calculated)
10.995
GRAVY (calculated)
-0.489
Length
224 amino acids
Sequence
(BLAST)
001: MGRRPARCYR QIKNKPYPKS RYCRGVPDPK IRIYDVGMKK KGVDEFPFCV HLVSWEKENV SSEALEAARI ACNKYMTKFA GKDAFHLRVR VHPFHVLRIN
101: KMLSCAGADR LQTGMRGAFG KPQGTCARVS IGQVLLSVRC KDNNSNNAQE ALRRAKFKFP GRQKIIISGK WGFTKFSRAD YLKWKSENRI APDGVNAKLL
201: GCHGPLAARR PGKAFLPAAV AETS
Best Arabidopsis Sequence Match ( AT1G14320.1 )
(BLAST)
001: MGRRPARCYR QIKGKPYPKS RYCRGVPDPK IRIYDVGMKR KGVDEFPFCV HLVSWEKENV SSEALEAARI ACNKYMVKSA GKDAFHLRIR VHPFHVLRIN
101: KMLSCAGADR LQTGMRGAFG KALGTCARVA IGQVLLSVRC KDAHGHHAQE ALRRAKFKFP GRQKIIVSRK WGFTKFNRAD FTKLRQEKRV VPDGVNAKFL
201: SCHGPLANRQ PGSAFLPAHY
Arabidopsis Description
RPL10A60S ribosomal protein L10-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93VT9]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.