CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81630	Canola	cytosol	72.69	98.91
CDX96861	Canola	cytosol	86.75	98.18
CDX84036	Canola	cytosol, mitochondrion	86.35	97.73
AT1G14320.1	Thale cress	mitochondrion	86.35	97.73
CDY49095	Canola	mitochondrion	85.94	97.27
CDY62060	Canola	mitochondrion	83.94	94.57
CDY28582	Canola	cytosol, mitochondrion	83.13	93.67
CDY44087	Canola	cytosol, mitochondrion	83.13	93.67
CDY38756	Canola	mitochondrion	82.73	93.64
CDY48394	Canola	cytosol	69.08	93.48
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	12.85	91.43
CDY39324	Canola	cytosol, mitochondrion	87.55	89.71
Solyc06g082670.2.1	Tomato	plastid	75.1	85.39
PGSC0003DMT400078129	Potato	cytosol, mitochondrion	75.1	85.39
TraesCS4A01G204800.1	Wheat	plastid	73.9	84.79
EER93866	Sorghum	cytosol	74.7	84.55
TraesCS4B01G108400.1	Wheat	golgi, unclear	73.49	84.33
PGSC0003DMT400006183	Potato	cytosol	61.85	84.15
Zm00001d033128_P001	Maize	plasma membrane, plastid	74.3	84.09
TraesCS1A01G112500.1	Wheat	nucleus	73.9	84.02
TraesCS1B01G132700.1	Wheat	cytosol, mitochondrion	73.9	84.02
TraesCS1D01G114100.1	Wheat	cytosol, mitochondrion	73.9	84.02
GSMUA_Achr10P...	Banana	cytosol	75.5	83.93
TraesCS4D01G105600.1	Wheat	cytosol, mitochondrion	73.09	83.87
GSMUA_Achr8P01550_001	Banana	cytosol, mitochondrion	75.5	83.56
Os05t0169100-01	Rice	nucleus, plastid	72.69	82.65
EES06560	Sorghum	cytosol	74.3	82.59
Solyc06g007520.2.1	Tomato	nucleus, unclear	75.5	82.1
Os11t0220800-01	Rice	nucleus	73.09	81.25
Solyc06g082650.2.1	Tomato	nucleus	66.27	80.1
CDY01747	Canola	mitochondrion	83.94	78.87
GSMUA_Achr6P15860_001	Banana	mitochondrion	46.18	77.18
VIT_06s0004g08260.t01	Wine grape	cytosol, mitochondrion	66.27	75.34
HORVU4Hr1G016190.4	Barley	extracellular, golgi	59.84	74.13
KRG98102	Soybean	mitochondrion, plastid	76.71	72.62
VIT_01s0150g00580.t01	Wine grape	endoplasmic reticulum	77.91	71.85
HORVU1Hr1G024710.4	Barley	mitochondrion	71.49	69.53
GSMUA_Achr6P08650_001	Banana	endoplasmic reticulum, extracellular	26.91	56.78

Protein Annotations

MapMan:17.1.2.1.9	Gene3D:2.20.25.330	Gene3D:3.90.1170.10	GO:A0A078H7B1	UniProt:A0A078H7B1	EnsemblPlants:CDY33756
ProteinID:CDY33756	ProteinID:CDY33756.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00055171001	InterPro:IPR036920
PFAM:PF00252	PIRSF:PIRSF005590	ScanProsite:PS01257	PANTHER:PTHR11726	PANTHER:PTHR11726:SF22	InterPro:Ribosomal_L10e
InterPro:Ribosomal_L10e/L16	InterPro:Ribosomal_L10e/L16_sf	InterPro:Ribosomal_L10e_CS	SUPFAM:SSF54686	TIGRFAMs:TIGR00279	UniParc:UPI0004EDE7D7

Description

BnaA09g45620DBnaA09g45620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7B1]

Coordinates

chrLK032321:-:225894..227220

Molecular Weight (calculated)

28246.7 Da

IEP (calculated)

11.140

GRAVY (calculated)

-0.464

Length

249 amino acids

Sequence
(BLAST)

001: MPSHFLKLVR AAAVLSSGSE WRREKERDAM GRRPARCYRQ IKGKPYPKSR YCRGVPDPKI RIYDVGMKKK GFDEFPFCVH LVSWEKENVS SEALEAARIA
101: CNKYMVKSAG KDAFHLRIRV HPFHVLRINK MLSCAGADRL QTGMRGAFGK ALGTCARVAI GQVLLSVRCK DGHGHHAQEA LRRAKFKFPG RQKIIVSRKW
201: GFTKFNRAYF TKLRQEKRVV PDGVNAKFLS CHGPLANRQP GSAFLPATY

Best Arabidopsis Sequence Match ( AT1G14320.1 )
(BLAST)

001: MGRRPARCYR QIKGKPYPKS RYCRGVPDPK IRIYDVGMKR KGVDEFPFCV HLVSWEKENV SSEALEAARI ACNKYMVKSA GKDAFHLRIR VHPFHVLRIN
101: KMLSCAGADR LQTGMRGAFG KALGTCARVA IGQVLLSVRC KDAHGHHAQE ALRRAKFKFP GRQKIIVSRK WGFTKFNRAD FTKLRQEKRV VPDGVNAKFL
201: SCHGPLANRQ PGSAFLPAHY

Arabidopsis Description

RPL10A60S ribosomal protein L10-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93VT9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.