Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion | 12.37 | 65.71 |
| PGSC0003DMT400006183 | Potato | cytosol | 64.52 | 65.57 |
| KRH53698 | Soybean | cytosol | 76.88 | 64.13 |
| KRH64232 | Soybean | nucleus | 76.88 | 64.13 |
| KRH72557 | Soybean | nucleus | 76.34 | 63.96 |
| KRH16949 | Soybean | nucleus | 76.34 | 63.96 |
| PGSC0003DMT400078129 | Potato | cytosol, mitochondrion | 73.66 | 62.56 |
| Solyc06g082670.2.1 | Tomato | plastid | 73.66 | 62.56 |
| TraesCS1A01G112500.1 | Wheat | nucleus | 73.12 | 62.1 |
| TraesCS1D01G114100.1 | Wheat | cytosol, mitochondrion | 73.12 | 62.1 |
| TraesCS1B01G132700.1 | Wheat | cytosol, mitochondrion | 73.12 | 62.1 |
| GSMUA_Achr6P15860_001 | Banana | mitochondrion | 48.92 | 61.07 |
| TraesCS4A01G204800.1 | Wheat | plastid | 70.97 | 60.83 |
| GSMUA_Achr10P... | Banana | cytosol | 73.12 | 60.71 |
| EER93866 | Sorghum | cytosol | 71.51 | 60.45 |
| Zm00001d033128_P001 | Maize | plasma membrane, plastid | 71.51 | 60.45 |
| GSMUA_Achr8P01550_001 | Banana | cytosol, mitochondrion | 73.12 | 60.44 |
| TraesCS4B01G108400.1 | Wheat | golgi, unclear | 70.43 | 60.37 |
| TraesCS4D01G105600.1 | Wheat | cytosol, mitochondrion | 69.89 | 59.91 |
| Solyc06g007520.2.1 | Tomato | nucleus, unclear | 73.66 | 59.83 |
| EES06560 | Sorghum | cytosol | 71.51 | 59.38 |
| KRH66434 | Soybean | cytosol, mitochondrion, plastid | 58.6 | 58.92 |
| Os05t0169100-01 | Rice | nucleus, plastid | 69.35 | 58.9 |
| Os11t0220800-01 | Rice | nucleus | 70.43 | 58.48 |
| KRH65844 | Soybean | cytosol | 33.33 | 57.41 |
| Solyc06g082650.2.1 | Tomato | nucleus | 63.44 | 57.28 |
| HORVU4Hr1G016190.4 | Barley | extracellular, golgi | 59.14 | 54.73 |
| VIT_06s0004g08260.t01 | Wine grape | cytosol, mitochondrion | 63.98 | 54.34 |
| KRG98102 | Soybean | mitochondrion, plastid | 73.12 | 51.71 |
| VIT_01s0150g00580.t01 | Wine grape | endoplasmic reticulum | 74.19 | 51.11 |
| HORVU1Hr1G024710.4 | Barley | mitochondrion | 68.28 | 49.61 |
| GSMUA_Achr6P08650_001 | Banana | endoplasmic reticulum, extracellular | 29.57 | 46.61 |
Protein Annotations
| MapMan:17.1.2.1.9 | Gene3D:3.90.1170.10 | UniProt:A0A0R0EFC0 | EnsemblPlantsGene:GLYMA_U024000 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| InterPro:IPR036920 | EnsemblPlants:KRG88858 | ProteinID:KRG88858 | ProteinID:KRG88858.1 | PFAM:PF00252 | PIRSF:PIRSF005590 |
| PANTHER:PTHR11726 | PANTHER:PTHR11726:SF22 | InterPro:Ribosomal_L10e | InterPro:Ribosomal_L10e/L16 | InterPro:Ribosomal_L10e/L16_sf | SUPFAM:SSF54686 |
| UniParc:UPI0006EE18FD | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_22:+:1027156..1029564
Molecular Weight (calculated)
21164.1 Da
IEP (calculated)
10.212
GRAVY (calculated)
-0.206
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSRWQFCHG VPDPKIRIYD VGMKKKGVDE FPFCVHLVCW EKENVSSEAL ESAFHLRVRM DPSHVLRINK MLSCAGADRL QIGMRGAFGK LLATCARVAI
101: GQVHLSVCCK DNNNHHAQEA LRCAKFKFLR CHKIIVSRKW GFTKFGRNDY LKFKSKYSTR LCLMLLGFHG PLANRQPGKP CFSGCS
101: GQVHLSVCCK DNNNHHAQEA LRCAKFKFLR CHKIIVSRKW GFTKFGRNDY LKFKSKYSTR LCLMLLGFHG PLANRQPGKP CFSGCS
001: MGRRPARCYR QIKGKPYPKS RYCRGVPDPK IRIYDVGMKR KGVDEFPFCV HLVSWEKENV SSEALEAARI ACNKYMVKSA GKDAFHLRIR VHPFHVLRIN
101: KMLSCAGADR LQTGMRGAFG KALGTCARVA IGQVLLSVRC KDAHGHHAQE ALRRAKFKFP GRQKIIVSRK WGFTKFNRAD FTKLRQEKRV VPDGVNAKFL
201: SCHGPLANRQ PGSAFLPAHY
101: KMLSCAGADR LQTGMRGAFG KALGTCARVA IGQVLLSVRC KDAHGHHAQE ALRRAKFKFP GRQKIIVSRK WGFTKFNRAD FTKLRQEKRV VPDGVNAKFL
201: SCHGPLANRQ PGSAFLPAHY
Arabidopsis Description
RPL10A60S ribosomal protein L10-1 [Source:UniProtKB/Swiss-Prot;Acc:Q93VT9]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.