CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion	17.59	54.29
Solyc06g082650.2.1	Tomato	nucleus	72.22	37.86
KRH66434	Soybean	cytosol, mitochondrion, plastid	62.96	36.76
VIT_06s0004g08260.t01	Wine grape	cytosol, mitochondrion	74.07	36.53
Solyc06g082670.2.1	Tomato	plastid	74.07	36.53
PGSC0003DMT400078129	Potato	cytosol, mitochondrion	73.15	36.07
KRH72557	Soybean	nucleus	74.07	36.04
KRH16949	Soybean	nucleus	74.07	36.04
KRH64232	Soybean	nucleus	74.07	35.87
KRH53698	Soybean	cytosol	74.07	35.87
HORVU4Hr1G016190.4	Barley	extracellular, golgi	66.67	35.82
TraesCS4A01G204800.1	Wheat	plastid	71.3	35.48
TraesCS4B01G108400.1	Wheat	golgi, unclear	71.3	35.48
EER93866	Sorghum	cytosol	72.22	35.45
GSMUA_Achr10P...	Banana	cytosol	73.15	35.27
TraesCS4D01G105600.1	Wheat	cytosol, mitochondrion	70.37	35.02
Zm00001d033128_P001	Maize	plasma membrane, plastid	71.3	35.0
Solyc06g007520.2.1	Tomato	nucleus, unclear	74.07	34.93
EES06560	Sorghum	cytosol	72.22	34.82
Os05t0169100-01	Rice	nucleus, plastid	70.37	34.7
TraesCS1A01G112500.1	Wheat	nucleus	70.37	34.7
TraesCS1B01G132700.1	Wheat	cytosol, mitochondrion	70.37	34.7
TraesCS1D01G114100.1	Wheat	cytosol, mitochondrion	70.37	34.7
GSMUA_Achr8P01550_001	Banana	cytosol, mitochondrion	72.22	34.67
Os11t0220800-01	Rice	nucleus	71.3	34.38
KRG88858	Soybean	cytosol	57.41	33.33
KRG98102	Soybean	mitochondrion, plastid	73.15	30.04
HORVU1Hr1G024710.4	Barley	mitochondrion	70.37	29.69
VIT_01s0150g00580.t01	Wine grape	endoplasmic reticulum	73.15	29.26
PGSC0003DMT400006183	Potato	cytosol	48.15	28.42
GSMUA_Achr6P15860_001	Banana	mitochondrion	22.22	16.11
GSMUA_Achr6P08650_001	Banana	endoplasmic reticulum, extracellular	5.56	5.08

Protein Annotations

Gene3D:3.90.1170.10	MapMan:35.1	UniProt:A0A0R0KPY3	EMBL:ACUP02001667	EnsemblPlantsGene:GLYMA_03G066100	GO:GO:0003674
GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0019538	InterPro:IPR036920	EnsemblPlants:KRH65844	ProteinID:KRH65844
ProteinID:KRH65844.1	PFAM:PF00252	PANTHER:PTHR11726	PANTHER:PTHR11726:SF22	InterPro:Ribosomal_L10e	InterPro:Ribosomal_L10e/L16
InterPro:Ribosomal_L10e/L16_sf	SUPFAM:SSF54686	TMHMM:TMhelix	UniParc:UPI0006ED9290	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:12717259..12719502

Molecular Weight (calculated)

12392.0 Da

IEP (calculated)

10.014

GRAVY (calculated)

-0.198

Length

108 amino acids

Sequence
(BLAST)

001: PAKCYRQIKN KSYSKSRFCH SVPDPKTRIY DVGMKKKGVD EFPFCVHLVS WEKENVSSEA LEGAFHLRVR VHPFHVLRIN KMLGLTYYTS IISSSGYSLF
101: SVLTFIGS

Best Arabidopsis Sequence Match ( AT1G66580.1 )
(BLAST)

001: MGRRPARCYR QIKGKPYPKS RYCRGVPDPK IRIYDVGMKR KGVDEFPFCV HLVSWEKENV SSEALEAARI ACNKYMVKSA GKDAFHLRIR VHPFHVLRIN
101: KMLSCAGADR LQTGMRGAFG KALGTCARVA IGQVLLSVRC KDNHGVHAQE ALRRAKFKFP GRQKIIVSRK WGFTKFNRAE YTKLRAMKRI VPDGVNAKFL
201: SNHGPLANRQ PGSAFISATS E

Arabidopsis Description

RPL10C60S ribosomal protein L10-3 [Source:UniProtKB/Swiss-Prot;Acc:Q93W22]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.