Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- golgi 1
- mitochondrion 1
- plastid 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX77428 | Canola | cytosol | 99.42 | 99.42 |
CDY66440 | Canola | cytosol | 99.13 | 95.25 |
Bra001945.1-P | Field mustard | cytosol | 90.99 | 85.29 |
Bra028370.1-P | Field mustard | cytosol | 72.97 | 84.51 |
AT3G24350.2 | Thale cress | cytosol | 79.94 | 76.18 |
VIT_11s0016g04370.t01 | Wine grape | plastid | 69.77 | 71.01 |
KRH61871 | Soybean | endoplasmic reticulum | 67.44 | 68.84 |
KRH52536 | Soybean | endoplasmic reticulum | 67.44 | 68.44 |
KRH61874 | Soybean | endoplasmic reticulum | 67.15 | 68.14 |
KRH52535 | Soybean | cytosol, plastid | 65.7 | 67.26 |
Solyc08g067910.2.1 | Tomato | plastid | 64.24 | 64.81 |
PGSC0003DMT400037606 | Potato | cytosol, plastid | 63.37 | 64.12 |
GSMUA_Achr10P... | Banana | cytosol | 61.63 | 61.81 |
PGSC0003DMT400011584 | Potato | cytosol, plastid | 60.76 | 59.38 |
GSMUA_Achr7P08550_001 | Banana | cytosol | 58.72 | 59.06 |
GSMUA_Achr6P04790_001 | Banana | cytosol | 58.14 | 58.65 |
HORVU3Hr1G022030.2 | Barley | plastid | 55.81 | 56.14 |
TraesCS3B01G138100.1 | Wheat | plastid | 55.81 | 56.14 |
Os01t0179200-01 | Rice | plasma membrane | 56.1 | 56.1 |
TraesCS3A01G119100.1 | Wheat | plastid | 55.81 | 55.98 |
TraesCS3D01G121000.2 | Wheat | plastid | 55.23 | 55.39 |
Zm00001d039614_P001 | Maize | plasma membrane | 55.23 | 55.39 |
EES02357 | Sorghum | plastid | 54.36 | 55.0 |
Zm00001d008758_P001 | Maize | plasma membrane | 54.65 | 54.65 |
Bra005866.1-P | Field mustard | cytosol, plastid | 45.06 | 45.59 |
Protein Annotations
Gene3D:1.20.5.110 | MapMan:22.7.1.3 | ProteinID:AAK94422 | ProteinID:AAK94422.1 | ProteinID:AAK94423 | ProteinID:AAK94423.1 |
EMBL:AF398141 | EMBL:AF398142 | EnsemblPlantsGene:Bra015036 | EnsemblPlants:Bra015036.1 | EnsemblPlants:Bra015036.1-P | GO:GO:0003674 |
GO:GO:0005484 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
GO:GO:0016043 | GO:GO:0016192 | GO:GO:0061025 | InterPro:IPR000727 | UniProt:M4DEW4 | PFAM:PF05739 |
ScanProsite:PS00914 | PFscan:PS50192 | PANTHER:PTHR19957 | PANTHER:PTHR19957:SF206 | SMART:SM00397 | InterPro:SNARE |
SUPFAM:SSF47661 | InterPro:Syntaxin/epimorphin_CS | TMHMM:TMhelix | InterPro:T_SNARE_dom | UniParc:UPI0002540CF5 | SEG:seg |
Description
AT3G24350 (E=6e-129) SYP32, ATSYP32 | SYP32 (SYNTAXIN OF PLANTS 32); SNAP receptor
Coordinates
chrA07:-:4068089..4069652
Molecular Weight (calculated)
38532.6 Da
IEP (calculated)
9.896
GRAVY (calculated)
-0.507
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MQARRGQSSY RDRTDEFFGI VETLRRSIAP DAANNVPYGG GGGGRREDPR SAVANQSEFK KRAAVIGLAI NQTSQKLSKL AQLAKRSSVF DDPTREIQEL
101: TAVIKQEISS LNSALIDLQA VRNSHNDERT ISRDTTTHSA TVVDDLKNRL MDTTKEFKDV LTLRTENMKI HEIRRQRFTS NPSKESTNPF VRQRPLASKP
201: AATQPAPLPW ASSSSSSSSS SQLVPRRQGE AESSPLLQQS QQQQQQMVPL QDTYMESRAE ALHNVESTIH ELSNIFTQLA TMVSQQGEIA IRIDQNMEDT
301: LANVEGAQSQ LARYLNSISS NRWLMIKIFF VLIAFLMVFL FFVA
101: TAVIKQEISS LNSALIDLQA VRNSHNDERT ISRDTTTHSA TVVDDLKNRL MDTTKEFKDV LTLRTENMKI HEIRRQRFTS NPSKESTNPF VRQRPLASKP
201: AATQPAPLPW ASSSSSSSSS SQLVPRRQGE AESSPLLQQS QQQQQQMVPL QDTYMESRAE ALHNVESTIH ELSNIFTQLA TMVSQQGEIA IRIDQNMEDT
301: LANVEGAQSQ LARYLNSISS NRWLMIKIFF VLIAFLMVFL FFVA
001: MSARHGQSSY RDRSDEFFKI VETLRRSIAP APAANNVPYG NNRNDGARRE DLINKSEFNK RASHIGLAIN QTSQKLSKLA KLAKRTSVFD DPTQEIQELT
101: VVIKQEISAL NSALVDLQLF RSSQNDEGNN SRDRDKSTHS ATVVDDLKYR LMDTTKEFKD VLTMRTENMK VHESRRQLFS SNASKESTNP FVRQRPLAAK
201: AAASESVPLP WANGSSSSSS QLVPWKPGEG ESSPLLQQSQ QQQQQQQQQM VPLQDTYMQG RAEALHTVES TIHELSSIFT QLATMVSQQG EIAIRIDQNM
301: EDTLANVEGA QSQLARYLNS ISSNRWLMMK IFFVLIAFLM IFLFFVA
101: VVIKQEISAL NSALVDLQLF RSSQNDEGNN SRDRDKSTHS ATVVDDLKYR LMDTTKEFKD VLTMRTENMK VHESRRQLFS SNASKESTNP FVRQRPLAAK
201: AAASESVPLP WANGSSSSSS QLVPWKPGEG ESSPLLQQSQ QQQQQQQQQM VPLQDTYMQG RAEALHTVES TIHELSSIFT QLATMVSQQG EIAIRIDQNM
301: EDTLANVEGA QSQLARYLNS ISSNRWLMMK IFFVLIAFLM IFLFFVA
Arabidopsis Description
SYP32Syntaxin of plants 32 [Source:UniProtKB/TrEMBL;Acc:F4J6K6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.