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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • golgi 1
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77428 Canola cytosol 99.42 99.42
CDY66440 Canola cytosol 99.13 95.25
Bra001945.1-P Field mustard cytosol 90.99 85.29
Bra028370.1-P Field mustard cytosol 72.97 84.51
AT3G24350.2 Thale cress cytosol 79.94 76.18
VIT_11s0016g04370.t01 Wine grape plastid 69.77 71.01
KRH61871 Soybean endoplasmic reticulum 67.44 68.84
KRH52536 Soybean endoplasmic reticulum 67.44 68.44
KRH61874 Soybean endoplasmic reticulum 67.15 68.14
KRH52535 Soybean cytosol, plastid 65.7 67.26
Solyc08g067910.2.1 Tomato plastid 64.24 64.81
PGSC0003DMT400037606 Potato cytosol, plastid 63.37 64.12
GSMUA_Achr10P... Banana cytosol 61.63 61.81
PGSC0003DMT400011584 Potato cytosol, plastid 60.76 59.38
GSMUA_Achr7P08550_001 Banana cytosol 58.72 59.06
GSMUA_Achr6P04790_001 Banana cytosol 58.14 58.65
HORVU3Hr1G022030.2 Barley plastid 55.81 56.14
TraesCS3B01G138100.1 Wheat plastid 55.81 56.14
Os01t0179200-01 Rice plasma membrane 56.1 56.1
TraesCS3A01G119100.1 Wheat plastid 55.81 55.98
TraesCS3D01G121000.2 Wheat plastid 55.23 55.39
Zm00001d039614_P001 Maize plasma membrane 55.23 55.39
EES02357 Sorghum plastid 54.36 55.0
Zm00001d008758_P001 Maize plasma membrane 54.65 54.65
Bra005866.1-P Field mustard cytosol, plastid 45.06 45.59
Protein Annotations
Gene3D:1.20.5.110MapMan:22.7.1.3ProteinID:AAK94422ProteinID:AAK94422.1ProteinID:AAK94423ProteinID:AAK94423.1
EMBL:AF398141EMBL:AF398142EnsemblPlantsGene:Bra015036EnsemblPlants:Bra015036.1EnsemblPlants:Bra015036.1-PGO:GO:0003674
GO:GO:0005484GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0006810GO:GO:0006886GO:GO:0008150GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0016192GO:GO:0061025InterPro:IPR000727UniProt:M4DEW4PFAM:PF05739
ScanProsite:PS00914PFscan:PS50192PANTHER:PTHR19957PANTHER:PTHR19957:SF206SMART:SM00397InterPro:SNARE
SUPFAM:SSF47661InterPro:Syntaxin/epimorphin_CSTMHMM:TMhelixInterPro:T_SNARE_domUniParc:UPI0002540CF5SEG:seg
Description
AT3G24350 (E=6e-129) SYP32, ATSYP32 | SYP32 (SYNTAXIN OF PLANTS 32); SNAP receptor
Coordinates
chrA07:-:4068089..4069652
Molecular Weight (calculated)
38532.6 Da
IEP (calculated)
9.896
GRAVY (calculated)
-0.507
Length
344 amino acids
Sequence
(BLAST)
001: MQARRGQSSY RDRTDEFFGI VETLRRSIAP DAANNVPYGG GGGGRREDPR SAVANQSEFK KRAAVIGLAI NQTSQKLSKL AQLAKRSSVF DDPTREIQEL
101: TAVIKQEISS LNSALIDLQA VRNSHNDERT ISRDTTTHSA TVVDDLKNRL MDTTKEFKDV LTLRTENMKI HEIRRQRFTS NPSKESTNPF VRQRPLASKP
201: AATQPAPLPW ASSSSSSSSS SQLVPRRQGE AESSPLLQQS QQQQQQMVPL QDTYMESRAE ALHNVESTIH ELSNIFTQLA TMVSQQGEIA IRIDQNMEDT
301: LANVEGAQSQ LARYLNSISS NRWLMIKIFF VLIAFLMVFL FFVA
Best Arabidopsis Sequence Match ( AT3G24350.1 )
(BLAST)
001: MSARHGQSSY RDRSDEFFKI VETLRRSIAP APAANNVPYG NNRNDGARRE DLINKSEFNK RASHIGLAIN QTSQKLSKLA KLAKRTSVFD DPTQEIQELT
101: VVIKQEISAL NSALVDLQLF RSSQNDEGNN SRDRDKSTHS ATVVDDLKYR LMDTTKEFKD VLTMRTENMK VHESRRQLFS SNASKESTNP FVRQRPLAAK
201: AAASESVPLP WANGSSSSSS QLVPWKPGEG ESSPLLQQSQ QQQQQQQQQM VPLQDTYMQG RAEALHTVES TIHELSSIFT QLATMVSQQG EIAIRIDQNM
301: EDTLANVEGA QSQLARYLNS ISSNRWLMMK IFFVLIAFLM IFLFFVA
Arabidopsis Description
SYP32Syntaxin of plants 32 [Source:UniProtKB/TrEMBL;Acc:F4J6K6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.