Factsheet for GSMUA_Achr7P08550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
golgi 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	88.3	88.05
GSMUA_Achr6P04790_001	Banana	cytosol	81.87	82.11
Os01t0179200-01	Rice	plasma membrane	76.02	75.58
EES02357	Sorghum	plastid	74.85	75.29
Zm00001d008758_P001	Maize	plasma membrane	74.56	74.13
Zm00001d039614_P001	Maize	plasma membrane	74.27	74.05
HORVU3Hr1G022030.2	Barley	plastid	73.98	73.98
TraesCS3A01G119100.1	Wheat	plastid	73.98	73.76
TraesCS3B01G138100.1	Wheat	plastid	73.68	73.68
TraesCS3D01G121000.2	Wheat	plastid	73.39	73.18
VIT_11s0016g04370.t01	Wine grape	plastid	71.05	71.89
VIT_04s0008g04350.t01	Wine grape	cytosol, plastid	68.71	69.12
KRH61871	Soybean	endoplasmic reticulum	67.84	68.84
KRH52536	Soybean	endoplasmic reticulum	68.13	68.73
KRH52535	Soybean	cytosol, plastid	67.25	68.45
KRH61874	Soybean	endoplasmic reticulum	67.54	68.14
Solyc08g067910.2.1	Tomato	plastid	67.54	67.74
PGSC0003DMT400037606	Potato	cytosol, plastid	66.08	66.47
PGSC0003DMT400011584	Potato	cytosol, plastid	64.62	62.78
CDX94818	Canola	cytosol	59.65	60.53
Bra028370.1-P	Field mustard	cytosol	51.46	59.26
CDY47175	Canola	cytosol	59.06	59.06
CDY67342	Canola	cytosol	58.77	58.94
Bra015036.1-P	Field mustard	cytosol	59.06	58.72
CDX77428	Canola	cytosol	58.77	58.43
CDX93010	Canola	cytosol	59.65	57.79
AT3G24350.2	Thale cress	cytosol	59.65	56.51
CDY66440	Canola	cytosol	58.77	56.15
Bra001945.1-P	Field mustard	cytosol	59.94	55.86

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.1.3	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0061025
EnsemblPlantsGene:GSMUA_Achr7G08550_001	EnsemblPlants:GSMUA_Achr7P08550_001	EnsemblPlants:GSMUA_Achr7T08550_001	InterPro:IPR000727	UniProt:M0TFU5	PFAM:PF00804
PFAM:PF05739	PFAM:PF11416	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF206
SMART:SM00397	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin-5_N	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N
TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI00029672E2	SEG:seg	:	:

Description

Syntaxin-32 [Source:GMGC_GENE;Acc:GSMUA_Achr7G08550_001]

Coordinates

chr7:+:6384082..6390248

Molecular Weight (calculated)

38111.3 Da

IEP (calculated)

9.669

GRAVY (calculated)

-0.413

Length

342 amino acids

Sequence
(BLAST)

001: MNPRPGQTSY RDRTQEFLKA VENFKKSFAS IPDATSSIAA PKFEGPKSAA SIQSEFSRRA SQIGLGIHQT SQKLAKLAKL AKKTSVFDDP TVQIQELTAV
101: IKQDITALNS AVVDLQLLCN SQNESGNMSR DTTNHSTTVV DNLKTRLMSA TKEFKEVLTM RTENLKVHEN RRQLFSSSAS KEATNPFLRQ RPLVSRGSND
201: SASPPAPWEN DSTASAPLFP RRKLNGDPSS STQPLIQQQQ QQQQMVPAQD SYMQSRAEAL QNVESTIHEL SNIFTQLATM VSQQGELAIR IDENMDDTLT
301: NVEGAQGALL KYLNSISSNR WLMIKIFFVL MVFLMIFLFF VA

Best Arabidopsis Sequence Match ( AT3G24350.1 )
(BLAST)

001: MSARHGQSSY RDRSDEFFKI VETLRRSIAP APAANNVPYG NNRNDGARRE DLINKSEFNK RASHIGLAIN QTSQKLSKLA KLAKRTSVFD DPTQEIQELT
101: VVIKQEISAL NSALVDLQLF RSSQNDEGNN SRDRDKSTHS ATVVDDLKYR LMDTTKEFKD VLTMRTENMK VHESRRQLFS SNASKESTNP FVRQRPLAAK
201: AAASESVPLP WANGSSSSSS QLVPWKPGEG ESSPLLQQSQ QQQQQQQQQM VPLQDTYMQG RAEALHTVES TIHELSSIFT QLATMVSQQG EIAIRIDQNM
301: EDTLANVEGA QSQLARYLNS ISSNRWLMMK IFFVLIAFLM IFLFFVA

Arabidopsis Description

SYP32Syntaxin of plants 32 [Source:UniProtKB/TrEMBL;Acc:F4J6K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.