Factsheet for GSMUA_Achr10P28310_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
plasma membrane 1
cytosol 2
golgi 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08550_001	Banana	cytosol	88.05	88.3
GSMUA_Achr6P04790_001	Banana	cytosol	79.88	80.35
EES02357	Sorghum	plastid	73.47	74.12
Os01t0179200-01	Rice	plasma membrane	74.05	73.84
Zm00001d039614_P001	Maize	plasma membrane	73.47	73.47
Zm00001d008758_P001	Maize	plasma membrane	73.18	72.97
HORVU3Hr1G022030.2	Barley	plastid	71.43	71.64
TraesCS3A01G119100.1	Wheat	plastid	71.43	71.43
TraesCS3B01G138100.1	Wheat	plastid	71.14	71.34
TraesCS3D01G121000.2	Wheat	plastid	71.14	71.14
VIT_11s0016g04370.t01	Wine grape	plastid	69.39	70.41
KRH52536	Soybean	endoplasmic reticulum	68.8	69.62
VIT_04s0008g04350.t01	Wine grape	cytosol, plastid	68.8	69.41
KRH61874	Soybean	endoplasmic reticulum	68.22	69.03
KRH61871	Soybean	endoplasmic reticulum	67.64	68.84
KRH52535	Soybean	cytosol, plastid	66.47	67.86
Solyc08g067910.2.1	Tomato	plastid	66.18	66.57
PGSC0003DMT400037606	Potato	cytosol, plastid	65.01	65.59
CDX94818	Canola	cytosol	61.52	62.61
PGSC0003DMT400011584	Potato	cytosol, plastid	63.56	61.93
Bra015036.1-P	Field mustard	cytosol	61.81	61.63
CDY47175	Canola	cytosol	61.22	61.4
CDX77428	Canola	cytosol	61.52	61.34
CDY67342	Canola	cytosol	60.93	61.29
Bra028370.1-P	Field mustard	cytosol	53.06	61.28
CDX93010	Canola	cytosol	61.52	59.77
CDY66440	Canola	cytosol	61.52	58.94
AT3G24350.2	Thale cress	cytosol	61.81	58.73
Bra001945.1-P	Field mustard	cytosol	62.39	58.31

Protein Annotations

Gene3D:1.20.5.110	MapMan:22.7.1.3	GO:GO:0003674	GO:GO:0005484	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016192	GO:GO:0061025
EnsemblPlantsGene:GSMUA_Achr10G28310_001	EnsemblPlants:GSMUA_Achr10P28310_001	EnsemblPlants:GSMUA_Achr10T28310_001	InterPro:IPR000727	UniProt:M0RM55	PFAM:PF00804
PFAM:PF05739	PFAM:PF11416	ScanProsite:PS00914	PFscan:PS50192	PANTHER:PTHR19957	PANTHER:PTHR19957:SF206
SMART:SM00397	InterPro:SNARE	SUPFAM:SSF47661	InterPro:Syntaxin-5_N	InterPro:Syntaxin/epimorphin_CS	InterPro:Syntaxin_N
TMHMM:TMhelix	InterPro:T_SNARE_dom	UniParc:UPI0002955636	SEG:seg	:	:

Description

Syntaxin-32 [Source:GMGC_GENE;Acc:GSMUA_Achr10G28310_001]

Coordinates

chr10:-:31170412..31174244

Molecular Weight (calculated)

38325.4 Da

IEP (calculated)

9.417

GRAVY (calculated)

-0.473

Length

343 amino acids

Sequence
(BLAST)

001: MNARHGQTSY RDRTQEFIKT IENLKKSSST PDAPSSNAVS RLEVPKSAAS IQSEFSKRAS QIGLGIHQTS QKLTNLAKLA KRTSVFDDPT VEIQELTAVI
101: KQDITALNSA VVDLQHLCDS QNKGGNMSRD TTNHSTTVVD NLKNRLMSTT KEFKEVLTMR TENLKVHENR RQLFSSSASK DATNPFLRQR PLVSKGSNDS
201: SALAPPAPWE NSSTSSSPLF PRRKTNEDPS SSTQPLIQQQ QQQQQIVPIQ DSYMQSRAEA LQNVESTIHE LSNIFTQLAT MVSQQGELAI RIDENMDDTL
301: ANVEGAQGAL LRYLNSISSN RWLMIKIFFV LMVFLMIFLF FVA

Best Arabidopsis Sequence Match ( AT3G24350.1 )
(BLAST)

001: MSARHGQSSY RDRSDEFFKI VETLRRSIAP APAANNVPYG NNRNDGARRE DLINKSEFNK RASHIGLAIN QTSQKLSKLA KLAKRTSVFD DPTQEIQELT
101: VVIKQEISAL NSALVDLQLF RSSQNDEGNN SRDRDKSTHS ATVVDDLKYR LMDTTKEFKD VLTMRTENMK VHESRRQLFS SNASKESTNP FVRQRPLAAK
201: AAASESVPLP WANGSSSSSS QLVPWKPGEG ESSPLLQQSQ QQQQQQQQQM VPLQDTYMQG RAEALHTVES TIHELSSIFT QLATMVSQQG EIAIRIDQNM
301: EDTLANVEGA QSQLARYLNS ISSNRWLMMK IFFVLIAFLM IFLFFVA

Arabidopsis Description

SYP32Syntaxin of plants 32 [Source:UniProtKB/TrEMBL;Acc:F4J6K6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.