Factsheet for Bra033037.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

plastid 1
mitochondrion 1
golgi 3
plasma membrane 4
extracellular 2
endoplasmic reticulum 2
vacuole 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra026110.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G28080.1	Bra026110.1-P	AT1G15760.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49754	Canola	plasma membrane	79.01	93.84
AT3G28100.1	Thale cress	plasma membrane	71.11	81.59
Bra025321.1-P	Field mustard	plasma membrane	75.06	81.07
AT3G28080.1	Thale cress	golgi, plasma membrane, vacuole	67.65	76.54
AT3G28070.1	Thale cress	golgi, plasma membrane, plastid, vacuole	67.9	76.39
Bra027523.1-P	Field mustard	plasma membrane, vacuole	23.46	53.67
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.22	48.31
Bra033035.1-P	Field mustard	plasma membrane	43.7	48.23
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	38.02	42.42
Bra025320.1-P	Field mustard	cytosol	47.16	41.79
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	37.53	41.76
Bra030338.1-P	Field mustard	plasma membrane	35.8	41.55
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	9.63	41.05
Bra025598.1-P	Field mustard	plasma membrane	23.95	36.06
Bra028450.1-P	Field mustard	plasma membrane	38.02	32.98
Bra007904.1-P	Field mustard	golgi, plasma membrane	24.2	26.13
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	22.96	25.83
Bra003959.1-P	Field mustard	golgi, plasma membrane	23.46	25.47
Bra027819.1-P	Field mustard	plasma membrane	23.21	25.2
Bra028451.1-P	Field mustard	plasma membrane	40.25	22.0

Protein Annotations

EnsemblPlants:Bra033037.1	EnsemblPlants:Bra033037.1-P	EnsemblPlantsGene:Bra033037	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF64	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00025471FF	UniProt:M4EW54	MapMan:24.2.1.5	:

Description

AT3G28100 (E=3e-129) | nodulin MtN21 family protein

Coordinates

chrA02:-:21778099..21781202

Molecular Weight (calculated)

44315.3 Da

IEP (calculated)

9.377

GRAVY (calculated)

0.781

Length

405 amino acids

Sequence
(BLAST)

001: MAGAVSLWRR EAVFLTAMLA SETGIVGMNT LFKAATSKGL NSYAFLGYSY LLASLLLLPS NIISNRSRSL PPLSFSILSK IGLLGLLGSM YVITGYIGVK
101: YSNPTLASAI SNITPALTFI LAIIFRMEKV NFKERSSVAK VMGTVLSLVG ALVVVLYHGP SVFVASSPPY LHFRQLSPSL SSSNSDWIIG GCLLTIKDIF
201: VSISFILQAH IMTEYPAAFT VSFFYSMCVS ILTSLTGLVV EKDNPSIWII RFDITLISIV TMGIFTPVYY VIHSWTVRYK GPLYLAIFKP LSILIAVVMS
301: AIFLGDSLYL GCLIGGVLIT LGFYAVMWGK ANEDKTRVEA GEEYHLDSWV PLCTVALEVP KPRMAYAFSV LRDLKLPVNG YAMDIVLLSS LPFVKSSLLF
401: LVITM

Best Arabidopsis Sequence Match ( AT3G28100.1 )
(BLAST)

001: MARTVSLWRR EAVFLTAMLA TETGVVGIST LFKVATSKGL NLYAFLGYSY LLASLLLLPS LFFTDRSRSL PPLSLSILSK IGLLGLLGSM YVITGYIGIE
101: YSSPTLASAI SNITPALTFI LAIIFRMEKV SFKERSSVAK VMGTILSLIG ALVVVLYHGP RVFVASSPPY INFRQLSPPL SSSNSDWLIG GALLTIRDIF
201: VSVSFILQAK IMSTYPAAFT VSFLYIVSVS IVTSMIGLVV EKNNPSVWII RFDITLITIV TMAIITSVYY VIHSWTVRHK GPLYLAIFKP LSILIAVVMS
301: AVFLNDSLYL GCLIGGLLIT LGFYAVMWGK ANEEKDQLLL VSGKERTPLL LNG

Arabidopsis Description

WAT1-related protein At3g28100 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRS5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.