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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plasma membrane, extracellular, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • extracellular 2
  • plasma membrane 3
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, mitochondrion, plasma membrane, vacuole
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
Plant-mPloc:plasma membrane
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15931 Canola extracellular, mitochondrion, plasma membrane, vacuole 100.0 100.0
CDX99639 Canola plasma membrane 58.95 27.86
Bra030337.1-P Field mustard golgi, nucleus, plasma membrane 87.37 22.86
Bra028452.1-P Field mustard golgi, plasma membrane, vacuole 80.0 20.88
AT5G40240.2 Thale cress plasma membrane 82.11 20.42
Bra027523.1-P Field mustard plasma membrane, vacuole 37.89 20.34
Bra030338.1-P Field mustard plasma membrane 68.42 18.62
KRH46524 Soybean plasma membrane 52.63 13.62
Bra028450.1-P Field mustard plasma membrane 63.16 12.85
VIT_14s0066g01640.t01 Wine grape plasma membrane 46.32 12.26
Bra039062.1-P Field mustard extracellular, plasma membrane, vacuole 43.16 11.58
Bra033035.1-P Field mustard plasma membrane 43.16 11.17
Bra025321.1-P Field mustard plasma membrane 42.11 10.67
Bra033037.1-P Field mustard golgi, plasma membrane, vacuole 41.05 9.63
Bra028451.1-P Field mustard plasma membrane 73.68 9.45
Bra025320.1-P Field mustard cytosol 43.16 8.97
Bra003959.1-P Field mustard golgi, plasma membrane 33.68 8.58
Bra007904.1-P Field mustard golgi, plasma membrane 33.68 8.53
Bra016228.1-P Field mustard extracellular, plasma membrane, vacuole 29.47 7.78
Bra027819.1-P Field mustard plasma membrane 30.53 7.77
Bra025598.1-P Field mustard plasma membrane 15.79 5.58
Protein Annotations
EnsemblPlants:Bra030336.1EnsemblPlants:Bra030336.1-PEnsemblPlantsGene:Bra030336GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF48SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0002543A60
UniProt:M4ENG6MapMan:24.2.1.5::::
Description
AT5G40240 (E=8e-042) | nodulin MtN21 family protein
Coordinates
chrA04:-:9029828..9030234
Molecular Weight (calculated)
10196.6 Da
IEP (calculated)
7.733
GRAVY (calculated)
0.696
Length
95 amino acids
Sequence
(BLAST)
1: MFSALTHTWG QHLKGPVYVS LFRPLSIAIA VAMGAIFLGD ALHLGSVIGS MILCFGFYTV IWGKAREDST KTVAGSEHSP LLLTHVVGVE DLLVK
Best Arabidopsis Sequence Match ( AT5G40240.1 )
(BLAST)
001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.