Factsheet for Bra027819.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 7
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65646	Canola	extracellular, plasma membrane	78.55	95.75
AT1G60050.1	Thale cress	plasma membrane	91.15	90.91
Bra003959.1-P	Field mustard	golgi, plasma membrane	60.59	60.59
Bra007904.1-P	Field mustard	golgi, plasma membrane	60.32	60.0
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	56.57	58.61
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	30.56	45.06
KRH53400	Soybean	plasma membrane	42.63	44.17
Solyc05g005870.2.1	Tomato	plasma membrane	42.36	42.47
Solyc04g025750.2.1	Tomato	plasma membrane	41.55	42.23
PGSC0003DMT400061666	Potato	plasma membrane	41.55	42.23
KRH53402	Soybean	extracellular, plasma membrane	41.02	42.03
Solyc04g025780.1.1	Tomato	extracellular	17.43	41.14
PGSC0003DMT400097482	Potato	extracellular, plasma membrane, plastid	19.3	37.31
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	7.77	30.53
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	28.69	30.23
Bra030338.1-P	Field mustard	plasma membrane	27.88	29.8
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	28.95	29.75
Bra033035.1-P	Field mustard	plasma membrane	29.22	29.7
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	27.88	28.57
Bra025321.1-P	Field mustard	plasma membrane	26.01	25.87
Bra027523.1-P	Field mustard	plasma membrane, vacuole	11.8	24.86
Bra025598.1-P	Field mustard	plasma membrane	17.69	24.54
Bra033037.1-P	Field mustard	golgi, plasma membrane, vacuole	25.2	23.21
Bra025320.1-P	Field mustard	cytosol	28.15	22.98
Bra028450.1-P	Field mustard	plasma membrane	28.42	22.7
Bra028451.1-P	Field mustard	plasma membrane	30.03	15.11

Protein Annotations

EnsemblPlants:Bra027819.1	EnsemblPlants:Bra027819.1-P	EnsemblPlantsGene:Bra027819	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF61	PFAM:PF00892	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002542744	UniProt:M4EGA5	MapMan:24.2.1.5	:	:

Description

AT1G60050 (E=1e-190) | nodulin-related

Coordinates

chrA09:+:8992400..8994521

Molecular Weight (calculated)

41226.5 Da

IEP (calculated)

5.690

GRAVY (calculated)

0.500

Length

373 amino acids

Sequence
(BLAST)

001: MGLMEARWEN IVPFIAMALM EACTIALTIL AKTALTGGMS PFVFIVYTNA LGSLLLLPYS FFFHRDERDD EPFLTKPSVV RIFLLGFTGV FLYQNLAFLG
101: LSYSSPIVVC AMGLQSPAFS FLLSIALGEG GLGWECKRTR GRVIGTLICF TGAFVEVIYL GPFIRPSPSS SPNSNFLTTI SHYLTFFKNS DNWALGSLFL
201: ACATLSISIW NIIQLDTVQK YPQVMKVVSA YSLAGTLQCA IFSAFMEPDL SAWKLELNMD FYLIIATGIF GSIIRTSVQV KCSKMKGPYY VPLFKPFGIL
301: WASIFGTSFF VNSLHYGSVL GAAIAGTGYL LIMWSQVQRD VQKDMVEEKA NHQLDSDDQI TPLLLGNDDV DQV

Best Arabidopsis Sequence Match ( AT1G60050.1 )
(BLAST)

001: MGLMDTRWET IVPFIVMALM EACTIALTIL AKTALTGGMS PFVFIVYTNA LGSLLLLPYS FYFHRDESDD EPFLTKPSLV RIFLLGFTGV FLFQNMAFLG
101: LSYSSPIVVC AMGLQSPAFS FLLSLALGKE GGLGWASKRT KGRVIGTLIC FTGAFVEVIY LGPFIRPSPP SSPTSNFLTT ISHYLTFFKN SDNWALGSLL
201: LACATLSISI WNIIQLDTVQ KYPQVMKVVS AYSLAGTLQC AIFSAFMEPD LSAWELKLNM DLYLIIATGI FGSIIRTSVQ VKCSKMKGPY YVPLFKPFGI
301: LWASIFGTSF FVNSLHYGSV LGAAIAGTGY LLIMWSQVQK DDPNETVEKN DNHQLDSDEQ TTPLLLANGD FDQV

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178WGH0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.