Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- plastid 3
- golgi 3
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400097482 | Potato | extracellular, plasma membrane, plastid | 35.57 | 46.63 |
| VIT_01s0026g00490.t01 | Wine grape | golgi, plasma membrane, vacuole | 35.97 | 39.22 |
| VIT_01s0026g00520.t01 | Wine grape | golgi, mitochondrion, plasma membrane, vacuole | 35.18 | 37.71 |
| CDY65646 | Canola | extracellular, plasma membrane | 45.06 | 37.25 |
| Solyc05g005870.2.1 | Tomato | plasma membrane | 49.8 | 33.87 |
| CDY23506 | Canola | plasma membrane | 49.01 | 33.24 |
| Bra003959.1-P | Field mustard | golgi, plasma membrane | 48.62 | 32.98 |
| CDX68349 | Canola | plasma membrane | 48.62 | 32.98 |
| CDY42998 | Canola | golgi, plasma membrane | 48.62 | 32.8 |
| Bra016228.1-P | Field mustard | extracellular, plasma membrane, vacuole | 46.64 | 32.78 |
| Solyc04g025750.2.1 | Tomato | plasma membrane | 47.43 | 32.7 |
| VIT_17s0000g07910.t01 | Wine grape | golgi, plasma membrane | 41.9 | 32.62 |
| CDY03759 | Canola | plasma membrane | 48.22 | 32.53 |
| Bra007904.1-P | Field mustard | golgi, plasma membrane | 48.22 | 32.53 |
| KRH53400 | Soybean | plasma membrane | 46.25 | 32.5 |
| PGSC0003DMT400061666 | Potato | plasma membrane | 46.64 | 32.15 |
| AT1G70260.1 | Thale cress | plasma membrane | 47.43 | 32.0 |
| CDY38802 | Canola | golgi, plasma membrane, vacuole | 47.04 | 31.73 |
| VIT_01s0026g00360.t01 | Wine grape | golgi, plasma membrane | 38.34 | 30.6 |
| CDY61698 | Canola | plasma membrane | 45.06 | 30.56 |
| Bra027819.1-P | Field mustard | plasma membrane | 45.06 | 30.56 |
| KRH53402 | Soybean | extracellular, plasma membrane | 43.48 | 30.22 |
| AT1G60050.1 | Thale cress | plasma membrane | 44.66 | 30.21 |
| VIT_14s0066g01650.t01 | Wine grape | golgi, plasma membrane, vacuole | 41.9 | 29.44 |
| VIT_01s0026g00530.t01 | Wine grape | golgi, plasma membrane | 39.92 | 29.19 |
| VIT_14s0066g01640.t01 | Wine grape | plasma membrane | 39.92 | 28.13 |
| VIT_01s0026g00540.t01 | Wine grape | golgi, plasma membrane | 37.55 | 26.69 |
| VIT_17s0000g07930.t01 | Wine grape | plasma membrane | 34.39 | 25.74 |
| CDY11606 | Canola | plasma membrane | 45.85 | 24.68 |
| Solyc04g025780.1.1 | Tomato | extracellular | 11.46 | 18.35 |
| VIT_01s0026g00500.t01 | Wine grape | extracellular, golgi, vacuole | 7.91 | 13.24 |
Protein Annotations
| MapMan:24.2.1.5 | EMBL:AM437572 | ProteinID:CAN71720 | ProteinID:CAN71720.1 | ProteinID:CBI32105 | ProteinID:CBI32105.3 |
| UniProt:D7TNN2 | InterPro:EamA_dom | EMBL:FN596002 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0022857 | GO:GO:0055085 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF61 | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0001BE3D2E | ArrayExpress:VIT_01s0026g00550 | EnsemblPlantsGene:VIT_01s0026g00550 | EnsemblPlants:VIT_01s0026g00550.t01 | InterPro:WAT1-related |
| SEG:seg | : | : | : | : | : |
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:D7TNN2]
Coordinates
chr1:+:9310500..9313022
Molecular Weight (calculated)
27812.4 Da
IEP (calculated)
7.658
GRAVY (calculated)
0.557
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNLIPAFSF VLAIILRTTK LDWRVTSGQA KIIGTFISIS GGTLMILYKG PLVRKTAFSA PFHHLELIPR HFIFSSTPEY WALGGILLAV ASLSASVWGI
101: IQVGTVKQYP EPITIAALYT SMGTIQSAIV AFVAERNLSA WKLELNMELL LIFLSAIFGS AIRCSVHIWC MHNKGPFYVP MFKPFGIIIA SIASVIFFGD
201: SLHYGSVIGA YIIGIGYYTL MWGQIREDDM KAGGEGIDSS EQKVPLLQEE EQV
101: IQVGTVKQYP EPITIAALYT SMGTIQSAIV AFVAERNLSA WKLELNMELL LIFLSAIFGS AIRCSVHIWC MHNKGPFYVP MFKPFGIIIA SIASVIFFGD
201: SLHYGSVIGA YIIGIGYYTL MWGQIREDDM KAGGEGIDSS EQKVPLLQEE EQV
001: MEVKVRRDEL VPFVAMAIME ACTIALTIMA KTALTGGMSP FVFVVYTNAF GSILLLPFSF LFHRNERTEQ SIFSWPLLVR VFFLGFTGIF MFQNLAFVGL
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV
Arabidopsis Description
WAT1-related protein At1g70260 [Source:UniProtKB/Swiss-Prot;Acc:F4I5D5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.