CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
golgi 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03759	Canola	plasma membrane	97.6	97.6
CDX68349	Canola	plasma membrane	90.67	91.15
CDY23506	Canola	plasma membrane	89.87	90.35
AT1G70260.1	Thale cress	plasma membrane	88.0	88.0
CDY38802	Canola	golgi, plasma membrane, vacuole	88.0	88.0
CDY11606	Canola	plasma membrane	86.93	69.36
CDY61698	Canola	plasma membrane	59.2	59.52
CDY65646	Canola	extracellular, plasma membrane	45.33	55.56
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	32.8	48.62
KRH53400	Soybean	plasma membrane	46.67	48.61
KRH53402	Soybean	extracellular, plasma membrane	46.4	47.8
Solyc04g025780.1.1	Tomato	extracellular	19.47	46.2
Solyc04g025750.2.1	Tomato	plasma membrane	45.07	46.05
PGSC0003DMT400061666	Potato	plasma membrane	44.27	45.23
Solyc05g005870.2.1	Tomato	plasma membrane	42.93	43.28
PGSC0003DMT400097482	Potato	extracellular, plasma membrane, plastid	21.07	40.93
CDY13131	Canola	plasma membrane, vacuole	16.27	34.46
CDY69634	Canola	extracellular	7.73	33.72
CDY15931	Canola	extracellular, mitochondrion, plasma membrane, vacuole	8.53	33.68
CDY04005	Canola	plasma membrane	32.8	33.52
CDY44581	Canola	plasma membrane	29.33	32.93
CDY00140	Canola	golgi, plasma membrane, vacuole	32.27	32.79
CDY20031	Canola	plasma membrane	32.27	32.79
CDY38468	Canola	extracellular	10.13	32.2
CDX99640	Canola	golgi, plasma membrane, vacuole	29.33	31.98
CDY15932	Canola	golgi, nucleus, plasma membrane	30.67	31.68
CDY36827	Canola	golgi, plasma membrane, plastid	31.2	31.62
CDX99641	Canola	plasma membrane	29.33	31.52
CDY15933	Canola	plasma membrane	29.33	31.43
CDY11676	Canola	golgi, plasma membrane, vacuole	30.67	31.42
CDY66864	Canola	golgi, plasma membrane, vacuole	29.07	31.05
CDX85184	Canola	plasma membrane	29.6	30.58
CDY11677	Canola	golgi, nucleus, plasma membrane	29.87	30.11
CDY53118	Canola	plasma membrane	26.67	29.76
CDY59916	Canola	cytosol, plasma membrane, plastid	8.53	29.63
CDY44584	Canola	golgi, plasma membrane, plastid	9.87	29.6
CDY11678	Canola	plasma membrane	28.27	29.12
CDX67449	Canola	golgi, plasma membrane, vacuole	28.27	29.04
CDX72470	Canola	plasma membrane	17.87	28.88
CDX95070	Canola	plasma membrane	17.87	28.88
CDY49754	Canola	plasma membrane	25.6	28.15
CDX85185	Canola	golgi, plasma membrane, vacuole	26.4	27.65
CDX86450	Canola	plasma membrane	26.67	26.67
CDY11675	Canola	golgi, nucleus, plasma membrane	20.0	26.22
CDX86451	Canola	cytosol	30.13	25.39
CDX99639	Canola	plasma membrane	13.33	24.88
CDX67447	Canola	plasma membrane	30.13	23.99
CDY59918	Canola	extracellular	8.27	23.66
CDY04006	Canola	cytosol, peroxisome, plasma membrane	20.8	22.1
CDY36829	Canola	plasma membrane	21.33	22.04
CDX67448	Canola	plasma membrane	29.33	14.91

Protein Annotations

MapMan:24.2.1.5	GO:A0A078I1P0	UniProt:A0A078I1P0	EnsemblPlants:CDY42998	ProteinID:CDY42998	ProteinID:CDY42998.1
InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00075790001	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF61	TMHMM:TMhelix	UniParc:UPI0004EC52AF	InterPro:WAT1-related	SEG:seg

Description

BnaC02g19720DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1P0]

Coordinates

chrLK032541:-:164616..167285

Molecular Weight (calculated)

42118.9 Da

IEP (calculated)

9.193

GRAVY (calculated)

0.436

Length

375 amino acids

Sequence
(BLAST)

001: MEVKVRKQEF VPFMAMVIME ACTIALTIMA KTALTGGMSP FVFVVYTNAL GSILLLPFSL FFHRNDRTEE SIFSWPLVVR VFFLGFTGVF LFQNLAFVGL
101: SFSSPIAVCA MGLLIPSFSF LLNLILGRSK LDLRNTSTRA KVMGTIISLS GAFVEELYKG PFIRPASSPS PDRLLKSIPK LFIYYNLPDN WFLGCIFLAA
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTVQCLFF SLYMERDLSA WKIEPNFDLF LIIATGIFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIGGVGYYTV SWGQLKETEE KQNPKEERKP IKTIYHQEED EYKVPLLISQ EESPV

Best Arabidopsis Sequence Match ( AT1G70260.1 )
(BLAST)

001: MEVKVRRDEL VPFVAMAIME ACTIALTIMA KTALTGGMSP FVFVVYTNAF GSILLLPFSF LFHRNERTEQ SIFSWPLLVR VFFLGFTGIF MFQNLAFVGL
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV

Arabidopsis Description

WAT1-related protein At1g70260 [Source:UniProtKB/Swiss-Prot;Acc:F4I5D5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.