Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028450.1-P | Field mustard | plasma membrane | 98.51 | 99.36 |
| CDY11675 | Canola | golgi, nucleus, plasma membrane | 55.84 | 91.96 |
| AT5G40230.1 | Thale cress | plasma membrane | 61.36 | 78.11 |
| CDY66864 | Canola | golgi, plasma membrane, vacuole | 55.2 | 74.07 |
| CDX99641 | Canola | plasma membrane | 52.87 | 71.35 |
| CDY15933 | Canola | plasma membrane | 52.87 | 71.14 |
| CDY11676 | Canola | golgi, plasma membrane, vacuole | 54.56 | 70.22 |
| CDY11678 | Canola | plasma membrane | 53.08 | 68.68 |
| CDX67449 | Canola | golgi, plasma membrane, vacuole | 53.08 | 68.49 |
| CDY15932 | Canola | golgi, nucleus, plasma membrane | 52.44 | 68.04 |
| CDY38468 | Canola | extracellular | 16.99 | 67.8 |
| CDY44581 | Canola | plasma membrane | 46.92 | 66.17 |
| CDX99640 | Canola | golgi, plasma membrane, vacuole | 48.2 | 65.99 |
| CDY11677 | Canola | golgi, nucleus, plasma membrane | 51.17 | 64.78 |
| CDY36827 | Canola | golgi, plasma membrane, plastid | 50.11 | 63.78 |
| CDY15931 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 12.74 | 63.16 |
| KRH46524 | Soybean | plasma membrane | 41.83 | 53.68 |
| VIT_14s0066g01640.t01 | Wine grape | plasma membrane | 38.22 | 50.14 |
| CDX99639 | Canola | plasma membrane | 21.02 | 49.25 |
| CDY44584 | Canola | golgi, plasma membrane, plastid | 12.74 | 48.0 |
| CDY69634 | Canola | extracellular | 8.7 | 47.67 |
| CDY36829 | Canola | plasma membrane | 34.61 | 44.9 |
| CDY49754 | Canola | plasma membrane | 31.42 | 43.4 |
| CDY20031 | Canola | plasma membrane | 33.76 | 43.09 |
| CDY00140 | Canola | golgi, plasma membrane, vacuole | 33.55 | 42.82 |
| CDY04005 | Canola | plasma membrane | 33.12 | 42.51 |
| CDX85184 | Canola | plasma membrane | 32.27 | 41.87 |
| CDY53118 | Canola | plasma membrane | 29.72 | 41.67 |
| CDX85185 | Canola | golgi, plasma membrane, vacuole | 30.57 | 40.22 |
| CDX86450 | Canola | plasma membrane | 31.85 | 40.0 |
| CDY13131 | Canola | plasma membrane, vacuole | 14.86 | 39.55 |
| CDY59916 | Canola | cytosol, plasma membrane, plastid | 8.49 | 37.04 |
| CDY59918 | Canola | extracellular | 10.19 | 36.64 |
| CDX72470 | Canola | plasma membrane | 18.05 | 36.64 |
| CDX95070 | Canola | plasma membrane | 18.05 | 36.64 |
| CDX86451 | Canola | cytosol | 32.27 | 34.16 |
| CDX67448 | Canola | plasma membrane | 53.5 | 34.15 |
| CDY42998 | Canola | golgi, plasma membrane | 23.99 | 30.13 |
| CDY03759 | Canola | plasma membrane | 23.99 | 30.13 |
| CDX68349 | Canola | plasma membrane | 23.35 | 29.49 |
| CDY23506 | Canola | plasma membrane | 23.14 | 29.22 |
| CDY04006 | Canola | cytosol, peroxisome, plasma membrane | 21.44 | 28.61 |
| CDY38802 | Canola | golgi, plasma membrane, vacuole | 22.29 | 28.0 |
| CDY61698 | Canola | plasma membrane | 21.87 | 27.61 |
| CDY65646 | Canola | extracellular, plasma membrane | 16.56 | 25.49 |
| CDY11606 | Canola | plasma membrane | 23.14 | 23.19 |
Protein Annotations
| MapMan:24.2.1.5 | GO:A0A078BTA0 | EnsemblPlants:CDX67447 | ProteinID:CDX67447 | ProteinID:CDX67447.1 | InterPro:EamA_dom |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | EnsemblPlantsGene:GSBRNA2T00098550001 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF48 |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EF0F8C | InterPro:WAT1-related | SEG:seg | : |
Description
BnaA07g14870D
Coordinates
chrLK031787:-:305224..308773
Molecular Weight (calculated)
51834.7 Da
IEP (calculated)
6.011
GRAVY (calculated)
0.517
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MARGVEEEVA WRYFCRDVVP FTAMVAVECV TVGANTLFKA ATMRGLNFYV FVFYNYVIAT LVLLPLSLLF RRSRRLPSAK SSVFFKIFLL ALVGFMSVVA
101: GCKGLEYSSP TLASAISNLT PAFTFTLAII FRMEQVVLRS SATQAKIIGT IVSMSGALVV VLYKGPKILA SSTTVSHDQH LTISESSWII GGLLIAAQYL
201: LVSIWLILQT RIMEVYPEEI NVVFLYNLCA TLISAPVCLF ATKDLSSFLL KPGLPLASVM FSVRIKPCLV SSLGSVIHTW GLHLKGPVYI SLFKPLSIVI
301: AVAMGSIFLG DALYLGSVVG SVILSLGFYT VIWGKSREGS TRTVAVYIFN VIILKEAANA CSLCIMDETL STHKVTCLIV HQFELQTSIP LTTSLNFFDL
401: AQVIGTFWNG EDEVEEEENK NSGEEEEVDE KSGIGEKAER ERGGILVCVV GERREVVSRR TDERVEDKEE E
101: GCKGLEYSSP TLASAISNLT PAFTFTLAII FRMEQVVLRS SATQAKIIGT IVSMSGALVV VLYKGPKILA SSTTVSHDQH LTISESSWII GGLLIAAQYL
201: LVSIWLILQT RIMEVYPEEI NVVFLYNLCA TLISAPVCLF ATKDLSSFLL KPGLPLASVM FSVRIKPCLV SSLGSVIHTW GLHLKGPVYI SLFKPLSIVI
301: AVAMGSIFLG DALYLGSVVG SVILSLGFYT VIWGKSREGS TRTVAVYIFN VIILKEAANA CSLCIMDETL STHKVTCLIV HQFELQTSIP LTTSLNFFDL
401: AQVIGTFWNG EDEVEEEENK NSGEEEEVDE KSGIGEKAER ERGGILVCVV GERREVVSRR TDERVEDKEE E
001: MTRGAGGETV AWSYFCRDVV PFTAMVAVEC VTVGSNTLFK AATLRGLSFY VFVFYTYVVA TLVLLPLSLI FGRSKRLPSA KTPVFFNIFL LALVGFMSLI
101: VGCKGIEYSS PTLASAISNL TPAFTFTLAV IFRMEQIVLR SSATQAKIIG TIVSISGALV VILYKGPKVL TDASLTPPSP TISLYQHLTS FDSSWIIGGL
201: LLATQYLLVS VWYILQTRVM ELYPEEITVV FLYNLCATLI SAPVCLFAEK DLNSFILKPG VSLASVMYSG GLVSSFGSVI HTWGLHLKGP VYISLFKPLS
301: IVIAVAMGVM FLGDALYLGS VIGSLILSLG FYTVIWGKAR EDSIKTVAGT EQSPLLPSHT IEEEASLSCD
101: VGCKGIEYSS PTLASAISNL TPAFTFTLAV IFRMEQIVLR SSATQAKIIG TIVSISGALV VILYKGPKVL TDASLTPPSP TISLYQHLTS FDSSWIIGGL
201: LLATQYLLVS VWYILQTRVM ELYPEEITVV FLYNLCATLI SAPVCLFAEK DLNSFILKPG VSLASVMYSG GLVSSFGSVI HTWGLHLKGP VYISLFKPLS
301: IVIAVAMGVM FLGDALYLGS VIGSLILSLG FYTVIWGKAR EDSIKTVAGT EQSPLLPSHT IEEEASLSCD
Arabidopsis Description
WAT1-related protein At5g40230 [Source:UniProtKB/Swiss-Prot;Acc:F4KHA8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.