CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 2
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	100.0	100.0
CDX99640	Canola	golgi, plasma membrane, vacuole	90.36	95.35
CDY15931	Canola	extracellular, mitochondrion, plasma membrane, vacuole	22.86	87.37
CDY11677	Canola	golgi, nucleus, plasma membrane	82.37	80.38
AT5G40240.2	Thale cress	plasma membrane	84.02	79.84
CDY44581	Canola	plasma membrane	70.52	76.65
CDY36827	Canola	golgi, plasma membrane, plastid	77.96	76.49
CDY11678	Canola	plasma membrane	76.58	76.37
CDX67449	Canola	golgi, plasma membrane, vacuole	76.03	75.62
CDY11676	Canola	golgi, plasma membrane, vacuole	76.03	75.41
CDX99641	Canola	plasma membrane	70.8	73.64
CDY15933	Canola	plasma membrane	70.52	73.14
CDY66864	Canola	golgi, plasma membrane, vacuole	68.87	71.23
CDY38468	Canola	extracellular	22.86	70.34
CDY11675	Canola	golgi, nucleus, plasma membrane	52.62	66.78
CDX99639	Canola	plasma membrane	33.88	61.19
CDX67447	Canola	plasma membrane	68.04	52.44
CDY36829	Canola	plasma membrane	52.07	52.07
KRH46524	Soybean	plasma membrane	52.34	51.77
VIT_14s0066g01640.t01	Wine grape	plasma membrane	50.96	51.53
CDY44584	Canola	golgi, plasma membrane, plastid	16.25	47.2
CDY69634	Canola	extracellular	10.74	45.35
CDY49754	Canola	plasma membrane	41.87	44.57
CDY00140	Canola	golgi, plasma membrane, vacuole	44.9	44.17
CDY20031	Canola	plasma membrane	44.63	43.9
CDY04005	Canola	plasma membrane	44.08	43.6
CDX85185	Canola	golgi, plasma membrane, vacuole	42.98	43.58
CDX86450	Canola	plasma membrane	44.35	42.93
CDY53118	Canola	plasma membrane	39.67	42.86
CDX85184	Canola	plasma membrane	41.87	41.87
CDY13131	Canola	plasma membrane, vacuole	20.11	41.24
CDY59918	Canola	extracellular	14.88	41.22
CDX72470	Canola	plasma membrane	25.07	39.22
CDX95070	Canola	plasma membrane	25.07	39.22
CDX67448	Canola	plasma membrane	76.58	37.67
CDY59916	Canola	cytosol, plasma membrane, plastid	10.74	36.11
CDX86451	Canola	cytosol	42.7	34.83
CDY42998	Canola	golgi, plasma membrane	31.68	30.67
CDY03759	Canola	plasma membrane	31.41	30.4
CDX68349	Canola	plasma membrane	31.13	30.29
CDY23506	Canola	plasma membrane	31.13	30.29
CDY04006	Canola	cytosol, peroxisome, plasma membrane	29.2	30.03
CDY38802	Canola	golgi, plasma membrane, vacuole	30.3	29.33
CDY61698	Canola	plasma membrane	29.48	28.69
CDY65646	Canola	extracellular, plasma membrane	22.04	26.14
CDY11606	Canola	plasma membrane	30.3	23.4

Protein Annotations

MapMan:24.2.1.5	GO:A0A078FSU8	UniProt:A0A078FSU8	EnsemblPlants:CDY15932	ProteinID:CDY15932	ProteinID:CDY15932.1
InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00090304001	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002543A5F	InterPro:WAT1-related
SEG:seg	:	:	:	:	:

Description

BnaA04g11790DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSU8]

Coordinates

chrLK032059:+:600690..602735

Molecular Weight (calculated)

39770.1 Da

IEP (calculated)

9.642

GRAVY (calculated)

0.709

Length

363 amino acids

Sequence
(BLAST)

001: MRGAREETVA WRYFSRDVVP FAAMFTVECT TVGANTLYKA ASLRGLSFYV FVFYSYLVST LLLLPLSLIF GRSRRLPPAK SPLFFKIFIL GLLGFMSQIA
101: ACKGIEYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SASQAKIIGA ILSISGALVI VLYKGPKVLS GASFTPSSSL PISVDQNLTS SDSSWMIGGL
201: FLASQYFLLS VWYILQTRVM ETYPEEIRVV FFYNLFAMII SAPVCLFLER NLTSWVLKPD ISLAAIVYSG FFVSLFSALT HTWGLHLKGA VYISLFRPLS
301: IAIAVAMGAI FLGDALPLGS VIGSMILCFG FYTVIWGKAR EDSTKTVAGS EHSPLLLTHV VGD

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.