CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
golgi 4
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38802	Canola	golgi, plasma membrane, vacuole	77.87	97.6
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	74.47	97.22
CDX68349	Canola	plasma membrane	69.79	87.94
CDY23506	Canola	plasma membrane	69.36	87.4
CDY42998	Canola	golgi, plasma membrane	69.36	86.93
CDY03759	Canola	plasma membrane	69.36	86.93
AT1G70260.1	Thale cress	plasma membrane	66.81	83.73
CDY61698	Canola	plasma membrane	47.23	59.52
CDY65646	Canola	extracellular, plasma membrane	36.38	55.88
KRH53400	Soybean	plasma membrane	37.66	49.17
KRH53402	Soybean	extracellular, plasma membrane	37.45	48.35
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	24.68	45.85
PGSC0003DMT400061666	Potato	plasma membrane	34.47	44.14
Solyc04g025750.2.1	Tomato	plasma membrane	34.47	44.14
Solyc04g025780.1.1	Tomato	extracellular	14.68	43.67
Solyc05g005870.2.1	Tomato	plasma membrane	34.04	43.01
PGSC0003DMT400097482	Potato	extracellular, plasma membrane, plastid	16.38	39.9
CDY69634	Canola	extracellular	5.96	32.56
CDY04005	Canola	plasma membrane	25.32	32.43
CDY13131	Canola	plasma membrane, vacuole	11.91	31.64
CDY00140	Canola	golgi, plasma membrane, vacuole	24.68	31.44
CDY38468	Canola	extracellular	7.87	31.36
CDY44584	Canola	golgi, plasma membrane, plastid	8.3	31.2
CDY44581	Canola	plasma membrane	22.13	31.14
CDY20031	Canola	plasma membrane	24.26	30.89
CDX99640	Canola	golgi, plasma membrane, vacuole	22.55	30.81
CDY15931	Canola	extracellular, mitochondrion, plasma membrane, vacuole	6.17	30.53
CDY53118	Canola	plasma membrane	21.7	30.36
CDY15932	Canola	golgi, nucleus, plasma membrane	23.4	30.3
CDY36827	Canola	golgi, plasma membrane, plastid	23.62	30.0
CDY66864	Canola	golgi, plasma membrane, vacuole	22.34	29.91
CDX99641	Canola	plasma membrane	22.13	29.8
CDY11676	Canola	golgi, plasma membrane, vacuole	23.19	29.78
CDX85184	Canola	plasma membrane	22.98	29.75
CDX72470	Canola	plasma membrane	14.68	29.74
CDX95070	Canola	plasma membrane	14.68	29.74
CDY15933	Canola	plasma membrane	22.13	29.71
CDY49754	Canola	plasma membrane	20.85	28.74
CDY59916	Canola	cytosol, plasma membrane, plastid	6.6	28.7
CDY11677	Canola	golgi, nucleus, plasma membrane	22.34	28.23
CDY11678	Canola	plasma membrane	21.49	27.75
CDX67449	Canola	golgi, plasma membrane, vacuole	21.49	27.67
CDX85185	Canola	golgi, plasma membrane, vacuole	20.64	27.09
CDX86450	Canola	plasma membrane	21.28	26.67
CDY11675	Canola	golgi, nucleus, plasma membrane	15.53	25.52
CDY59918	Canola	extracellular	7.02	25.19
CDX86451	Canola	cytosol	22.98	24.27
CDX67447	Canola	plasma membrane	23.19	23.14
CDY04006	Canola	cytosol, peroxisome, plasma membrane	17.02	22.66
CDX99639	Canola	plasma membrane	9.57	22.39
CDY36829	Canola	plasma membrane	15.96	20.66
CDX67448	Canola	plasma membrane	22.55	14.36

Protein Annotations

MapMan:24.2.1.5	GO:A0A078FED0	UniProt:A0A078FED0	EnsemblPlants:CDY11606	ProteinID:CDY11606	ProteinID:CDY11606.1
InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00049725001	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF61	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EEA654	InterPro:WAT1-related
SEG:seg	:	:	:	:	:

Description

BnaC06g31330DBnaC06g31330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FED0]

Coordinates

chrLK032012:+:458770..464238

Molecular Weight (calculated)

52479.5 Da

IEP (calculated)

9.090

GRAVY (calculated)

0.319

Length

470 amino acids

Sequence
(BLAST)

001: MEVKGRKETF VPFVSMVIME ACTIALTIMA KTAITGGMSP FVFVVYTNAF GSILLLPFSF FFHRNDRTEE SIFSRPLLVR VFFLGFTGIF LFQNLAFVGL
101: SFSSPIVVCA MGLLIPSFSF LLNLILGRSK LDWRNTSTRA KVLGTIMSFS GAFVEEMYKG PFIRPASSPS PTRLLKSIPK LLVYYTIPNN WFLGCIFLAA
201: AFFSVSLFNV IQTGTVKKYP HVMKVASFYS IVGTIQCIIF SLFMERDLSA WKIEPNFDLF LIIATGIFGN VIRPSIQVKC AQMKGPYYVP LFKPFGIFWA
301: TVFGTSFFVN SLRYGNVLGA AIGGVGYYSV SWGQLKETEE KQNPMEERKA IKPMHLHEED ENKAPLLINQ EESPILKSHH ASALLIAHSP PPYNHEESYN
401: LPTPCFLLAI SSDKMGNLFG CGTSLEVDGT AVVETKSSSV KEKIKFQKDI VQALDAEIRK QVTLENNVVL

Best Arabidopsis Sequence Match ( AT1G60050.1 )
(BLAST)

001: MGLMDTRWET IVPFIVMALM EACTIALTIL AKTALTGGMS PFVFIVYTNA LGSLLLLPYS FYFHRDESDD EPFLTKPSLV RIFLLGFTGV FLFQNMAFLG
101: LSYSSPIVVC AMGLQSPAFS FLLSLALGKE GGLGWASKRT KGRVIGTLIC FTGAFVEVIY LGPFIRPSPP SSPTSNFLTT ISHYLTFFKN SDNWALGSLL
201: LACATLSISI WNIIQLDTVQ KYPQVMKVVS AYSLAGTLQC AIFSAFMEPD LSAWELKLNM DLYLIIATGI FGSIIRTSVQ VKCSKMKGPY YVPLFKPFGI
301: LWASIFGTSF FVNSLHYGSV LGAAIAGTGY LLIMWSQVQK DDPNETVEKN DNHQLDSDEQ TTPLLLANGD FDQV

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178WGH0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.