Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- extracellular 2
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030336.1-P | Field mustard | extracellular, mitochondrion, plasma membrane, vacuole | 100.0 | 100.0 |
| CDY59916 | Canola | cytosol, plasma membrane, plastid | 36.84 | 32.41 |
| CDX99639 | Canola | plasma membrane | 58.95 | 27.86 |
| CDY15932 | Canola | golgi, nucleus, plasma membrane | 87.37 | 22.86 |
| CDY11677 | Canola | golgi, nucleus, plasma membrane | 84.21 | 21.51 |
| CDY36827 | Canola | golgi, plasma membrane, plastid | 82.11 | 21.08 |
| CDX67449 | Canola | golgi, plasma membrane, vacuole | 80.0 | 20.82 |
| CDY11678 | Canola | plasma membrane | 78.95 | 20.6 |
| AT5G40240.2 | Thale cress | plasma membrane | 82.11 | 20.42 |
| CDY13131 | Canola | plasma membrane, vacuole | 37.89 | 20.34 |
| CDX99640 | Canola | golgi, plasma membrane, vacuole | 70.53 | 19.48 |
| CDY11676 | Canola | golgi, plasma membrane, vacuole | 74.74 | 19.4 |
| CDX99641 | Canola | plasma membrane | 68.42 | 18.62 |
| CDY15933 | Canola | plasma membrane | 68.42 | 18.57 |
| CDY66864 | Canola | golgi, plasma membrane, vacuole | 66.32 | 17.95 |
| CDX95070 | Canola | plasma membrane | 42.11 | 17.24 |
| CDX72470 | Canola | plasma membrane | 42.11 | 17.24 |
| CDY44581 | Canola | plasma membrane | 52.63 | 14.97 |
| KRH46524 | Soybean | plasma membrane | 52.63 | 13.62 |
| CDX67447 | Canola | plasma membrane | 63.16 | 12.74 |
| VIT_14s0066g01640.t01 | Wine grape | plasma membrane | 46.32 | 12.26 |
| CDY49754 | Canola | plasma membrane | 42.11 | 11.73 |
| CDY04006 | Canola | cytosol, peroxisome, plasma membrane | 42.11 | 11.33 |
| CDY04005 | Canola | plasma membrane | 43.16 | 11.17 |
| CDY20031 | Canola | plasma membrane | 43.16 | 11.11 |
| CDY00140 | Canola | golgi, plasma membrane, vacuole | 43.16 | 11.11 |
| CDX85184 | Canola | plasma membrane | 42.11 | 11.02 |
| CDY53118 | Canola | plasma membrane | 37.89 | 10.71 |
| CDX86450 | Canola | plasma membrane | 42.11 | 10.67 |
| CDX85185 | Canola | golgi, plasma membrane, vacuole | 38.95 | 10.34 |
| CDY65646 | Canola | extracellular, plasma membrane | 30.53 | 9.48 |
| CDX67448 | Canola | plasma membrane | 72.63 | 9.35 |
| CDX86451 | Canola | cytosol | 43.16 | 9.21 |
| CDX68349 | Canola | plasma membrane | 33.68 | 8.58 |
| CDY23506 | Canola | plasma membrane | 33.68 | 8.58 |
| CDY42998 | Canola | golgi, plasma membrane | 33.68 | 8.53 |
| CDY03759 | Canola | plasma membrane | 33.68 | 8.53 |
| CDY61698 | Canola | plasma membrane | 30.53 | 7.77 |
| CDY38802 | Canola | golgi, plasma membrane, vacuole | 29.47 | 7.47 |
| CDY11606 | Canola | plasma membrane | 30.53 | 6.17 |
| CDY59918 | Canola | extracellular | 5.26 | 3.82 |
| CDY11675 | Canola | golgi, nucleus, plasma membrane | 7.37 | 2.45 |
| CDY36829 | Canola | plasma membrane | 7.37 | 1.93 |
| CDY44584 | Canola | golgi, plasma membrane, plastid | 0.0 | 0.0 |
| CDY69634 | Canola | extracellular | 0.0 | 0.0 |
| CDY38468 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY15931 | EnsemblPlantsGene:GSBRNA2T00090303001 | GO:A0A078FS25 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF48 | ProteinID:CDY15931 | ProteinID:CDY15931.1 | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0002543A60 | UniProt:A0A078FS25 | MapMan:24.2.1.5 | : | : |
Description
BnaA04g11800DBnaA04g11800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS25]
Coordinates
chrLK032059:+:598582..598988
Molecular Weight (calculated)
10196.6 Da
IEP (calculated)
7.733
GRAVY (calculated)
0.696
Length
95 amino acids
Sequence
(BLAST)
(BLAST)
1: MFSALTHTWG QHLKGPVYVS LFRPLSIAIA VAMGAIFLGD ALHLGSVIGS MILCFGFYTV IWGKAREDST KTVAGSEHSP LLLTHVVGVE DLLVK
001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.