Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027523.1-P | Field mustard | plasma membrane, vacuole | 94.44 | 57.63 |
| CDY13131 | Canola | plasma membrane, vacuole | 93.52 | 57.06 |
| CDY15931 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 32.41 | 36.84 |
| CDY53118 | Canola | plasma membrane | 77.78 | 25.0 |
| AT5G40210.1 | Thale cress | plasma membrane | 75.93 | 24.19 |
| CDX72470 | Canola | plasma membrane | 50.0 | 23.28 |
| CDX95070 | Canola | plasma membrane | 50.0 | 23.28 |
| CDY49754 | Canola | plasma membrane | 50.0 | 15.84 |
| CDX85184 | Canola | plasma membrane | 51.85 | 15.43 |
| CDY04006 | Canola | cytosol, peroxisome, plasma membrane | 50.0 | 15.3 |
| CDX99639 | Canola | plasma membrane | 27.78 | 14.93 |
| CDX86450 | Canola | plasma membrane | 49.07 | 14.13 |
| CDX85185 | Canola | golgi, plasma membrane, vacuole | 46.3 | 13.97 |
| CDY04005 | Canola | plasma membrane | 46.3 | 13.62 |
| CDY20031 | Canola | plasma membrane | 45.37 | 13.28 |
| CDY00140 | Canola | golgi, plasma membrane, vacuole | 45.37 | 13.28 |
| CDY66864 | Canola | golgi, plasma membrane, vacuole | 40.74 | 12.54 |
| CDX86451 | Canola | cytosol | 50.93 | 12.36 |
| CDY11676 | Canola | golgi, plasma membrane, vacuole | 38.89 | 11.48 |
| CDY36827 | Canola | golgi, plasma membrane, plastid | 38.89 | 11.35 |
| CDY15932 | Canola | golgi, nucleus, plasma membrane | 36.11 | 10.74 |
| CDX99641 | Canola | plasma membrane | 34.26 | 10.6 |
| CDY15933 | Canola | plasma membrane | 34.26 | 10.57 |
| CDY11677 | Canola | golgi, nucleus, plasma membrane | 35.19 | 10.22 |
| CDY11678 | Canola | plasma membrane | 34.26 | 10.16 |
| CDX67449 | Canola | golgi, plasma membrane, vacuole | 33.33 | 9.86 |
| CDY44581 | Canola | plasma membrane | 27.78 | 8.98 |
| CDY65646 | Canola | extracellular, plasma membrane | 25.0 | 8.82 |
| CDX99640 | Canola | golgi, plasma membrane, vacuole | 27.78 | 8.72 |
| CDY03759 | Canola | plasma membrane | 29.63 | 8.53 |
| CDY42998 | Canola | golgi, plasma membrane | 29.63 | 8.53 |
| CDX67447 | Canola | plasma membrane | 37.04 | 8.49 |
| CDX68349 | Canola | plasma membrane | 28.7 | 8.31 |
| CDY23506 | Canola | plasma membrane | 28.7 | 8.31 |
| CDY38802 | Canola | golgi, plasma membrane, vacuole | 27.78 | 8.0 |
| CDY61698 | Canola | plasma membrane | 25.0 | 7.24 |
| CDY11606 | Canola | plasma membrane | 28.7 | 6.6 |
| CDX67448 | Canola | plasma membrane | 40.74 | 5.96 |
| CDY59918 | Canola | extracellular | 5.56 | 4.58 |
| CDY36829 | Canola | plasma membrane | 7.41 | 2.2 |
| CDY11675 | Canola | golgi, nucleus, plasma membrane | 5.56 | 2.1 |
| CDY38468 | Canola | extracellular | 0.93 | 0.85 |
| CDY44584 | Canola | golgi, plasma membrane, plastid | 0.0 | 0.0 |
| CDY69634 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY59916 | EnsemblPlantsGene:GSBRNA2T00027892001 | GO:A0A078J8S8 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF64 | ProteinID:CDY59916 | ProteinID:CDY59916.1 | SEG:seg |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EB035D | UniProt:A0A078J8S8 | MapMan:24.2.1.5 | : |
Description
BnaC09g51760DBnaC09g51760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8S8]
Coordinates
chrLK033821:-:2423..2940
Molecular Weight (calculated)
11550.4 Da
IEP (calculated)
6.496
GRAVY (calculated)
0.832
Length
108 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDTICKTLI SLVATGILNS GYYIVHTWAV IYKGPVYLSM FKPLSILIAA ASTTIFLSES IYLGILIGGI LISVGFCMVL WGKAKEAKVD ILGTIESSPS
101: HEAPLLGN
101: HEAPLLGN
001: MVHGRLCNRD GWILTAMVVT EFSNVGVNTL VKAATSKGLS PFVVLVYSYT FGSLLLLPLT FFSFRSRSLP PLTFSILCNM GILGLIASAF QILGYNGIKY
101: SSPTLSSAMS NVNPAFTFIL AVVFRMENIS LGKKSSVAKV LGTILSIIGA LVVTLYHGPM LMSSHSDWII GGGLLALQYI LVSVSYLVMA HTMGRYPSAV
201: VVTLVHNVCI AVVCAFVSLL AEKDNPKAWV IRFDITLITV VATGILNSGY YVIHTWAVSH KGPVYLSMFK PLSILIAAVS TFIFLGESLY LGSVMGGILI
301: SIGFYMVLWG KAKEDKVDII GAIESSPSHN APLLDNFKS
101: SSPTLSSAMS NVNPAFTFIL AVVFRMENIS LGKKSSVAKV LGTILSIIGA LVVTLYHGPM LMSSHSDWII GGGLLALQYI LVSVSYLVMA HTMGRYPSAV
201: VVTLVHNVCI AVVCAFVSLL AEKDNPKAWV IRFDITLITV VATGILNSGY YVIHTWAVSH KGPVYLSMFK PLSILIAAVS TFIFLGESLY LGSVMGGILI
301: SIGFYMVLWG KAKEDKVDII GAIESSPSHN APLLDNFKS
Arabidopsis Description
WAT1-related protein At5g40210 [Source:UniProtKB/Swiss-Prot;Acc:Q945L4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.