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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:extracellular, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:secretory
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027819.1-P Field mustard plasma membrane 95.75 78.55
CDY61698 Canola plasma membrane 95.1 78.02
AT1G60050.1 Thale cress plasma membrane 87.25 71.39
CDX68349 Canola plasma membrane 57.52 47.19
CDY23506 Canola plasma membrane 57.19 46.92
CDY38802 Canola golgi, plasma membrane, vacuole 56.21 45.87
CDY03759 Canola plasma membrane 56.21 45.87
CDY42998 Canola golgi, plasma membrane 55.56 45.33
VIT_01s0026g00550.t01 Wine grape golgi, plasma membrane 37.25 45.06
PGSC0003DMT400097482 Potato extracellular, plasma membrane, plastid 23.53 37.31
CDY11606 Canola plasma membrane 55.88 36.38
KRH53400 Soybean plasma membrane 39.22 33.33
Solyc05g005870.2.1 Tomato plasma membrane 39.87 32.8
Solyc04g025750.2.1 Tomato plasma membrane 38.24 31.88
PGSC0003DMT400061666 Potato plasma membrane 38.24 31.88
KRH53402 Soybean extracellular, plasma membrane 37.25 31.32
CDY15931 Canola extracellular, mitochondrion, plasma membrane, vacuole 9.48 30.53
CDY38468 Canola extracellular 11.11 28.81
CDX95070 Canola plasma membrane 19.93 26.29
CDX72470 Canola plasma membrane 19.93 26.29
CDY59916 Canola cytosol, plasma membrane, plastid 8.82 25.0
CDY13131 Canola plasma membrane, vacuole 14.38 24.86
CDY66864 Canola golgi, plasma membrane, vacuole 27.78 24.22
CDY11676 Canola golgi, plasma membrane, vacuole 28.43 23.77
CDY11677 Canola golgi, nucleus, plasma membrane 28.43 23.39
CDY36827 Canola golgi, plasma membrane, plastid 27.78 22.97
Solyc04g025780.1.1 Tomato extracellular 11.76 22.78
CDY44581 Canola plasma membrane 24.51 22.46
CDX99641 Canola plasma membrane 25.49 22.35
CDY49754 Canola plasma membrane 24.84 22.29
CDY15933 Canola plasma membrane 25.49 22.29
CDX99640 Canola golgi, plasma membrane, vacuole 24.84 22.09
CDY04005 Canola plasma membrane 26.47 22.07
CDY15932 Canola golgi, nucleus, plasma membrane 26.14 22.04
CDY20031 Canola plasma membrane 26.47 21.95
CDY00140 Canola golgi, plasma membrane, vacuole 26.47 21.95
CDX85184 Canola plasma membrane 25.82 21.76
CDY11678 Canola plasma membrane 25.49 21.43
CDX67449 Canola golgi, plasma membrane, vacuole 24.84 20.82
CDY53118 Canola plasma membrane 22.22 20.24
CDX85185 Canola golgi, plasma membrane, vacuole 22.88 19.55
CDX86450 Canola plasma membrane 23.86 19.47
CDX99639 Canola plasma membrane 12.75 19.4
CDY04006 Canola cytosol, peroxisome, plasma membrane 22.22 19.26
CDY11675 Canola golgi, nucleus, plasma membrane 17.97 19.23
CDX86451 Canola cytosol 25.49 17.53
CDX67447 Canola plasma membrane 25.49 16.56
CDY44584 Canola golgi, plasma membrane, plastid 5.88 14.4
CDY36829 Canola plasma membrane 15.36 12.95
CDX67448 Canola plasma membrane 28.43 11.79
CDY59918 Canola extracellular 4.25 9.92
CDY69634 Canola extracellular 0.65 2.33
Protein Annotations
EnsemblPlants:CDY65646EnsemblPlantsGene:GSBRNA2T00046977001GO:A0A078JIP6GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF61ProteinID:CDY65646ProteinID:CDY65646.1SEG:seg
TMHMM:TMhelixUniParc:UPI0004EDCDC1UniProt:A0A078JIP6MapMan:24.2.1.5::
Description
BnaA09g53320DBnaA09g53320D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JIP6]
Coordinates
chrLK034874:+:3..9160
Molecular Weight (calculated)
33556.9 Da
IEP (calculated)
7.266
GRAVY (calculated)
0.390
Length
306 amino acids
Sequence
(BLAST)
001: NNSLKQGDGL RPKCLALGPS IVVFLYQNLA FLGLSYSSPI VVCAMGLQSP AFSFLLSIAL GEGGLGWECK RTRGRVIGTL ICFTGAFVEV IYLGPFIRPS
101: PSSSPNSNFL TTISHYLTFF KNSDNWALGS LFLACATLSI SIWNIIQLDT VQKYPQVMKV VSAYSLAGTL QCAIFSAFME PDLSAWKLEL NMDFYLIIAT
201: GIFGSIIRTS VQVKCSKMKG PYYVPLFKPF GILWASIFGT SFFVNSLHYG SVLGAAIAGT GYLLIMWSQV QRDVQKDMVE EKANHQLDSD DQITPLLLGN
301: DDVDQV
Best Arabidopsis Sequence Match ( AT1G60050.1 )
(BLAST)
001: MGLMDTRWET IVPFIVMALM EACTIALTIL AKTALTGGMS PFVFIVYTNA LGSLLLLPYS FYFHRDESDD EPFLTKPSLV RIFLLGFTGV FLFQNMAFLG
101: LSYSSPIVVC AMGLQSPAFS FLLSLALGKE GGLGWASKRT KGRVIGTLIC FTGAFVEVIY LGPFIRPSPP SSPTSNFLTT ISHYLTFFKN SDNWALGSLL
201: LACATLSISI WNIIQLDTVQ KYPQVMKVVS AYSLAGTLQC AIFSAFMEPD LSAWELKLNM DLYLIIATGI FGSIIRTSVQ VKCSKMKGPY YVPLFKPFGI
301: LWASIFGTSF FVNSLHYGSV LGAAIAGTGY LLIMWSQVQK DDPNETVEKN DNHQLDSDEQ TTPLLLANGD FDQV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178WGH0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.