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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • golgi 4
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 4
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, vacuole
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016228.1-P Field mustard extracellular, plasma membrane, vacuole 95.73 99.72
CDX68349 Canola plasma membrane 88.53 89.01
CDY23506 Canola plasma membrane 88.0 88.47
CDY42998 Canola golgi, plasma membrane 88.0 88.0
CDY03759 Canola plasma membrane 88.0 88.0
AT1G70260.1 Thale cress plasma membrane 84.8 84.8
CDY11606 Canola plasma membrane 97.6 77.87
CDY61698 Canola plasma membrane 59.2 59.52
CDY65646 Canola extracellular, plasma membrane 45.87 56.21
KRH53400 Soybean plasma membrane 47.73 49.72
KRH53402 Soybean extracellular, plasma membrane 47.2 48.63
VIT_01s0026g00550.t01 Wine grape golgi, plasma membrane 31.73 47.04
Solyc04g025750.2.1 Tomato plasma membrane 43.2 44.14
PGSC0003DMT400061666 Potato plasma membrane 43.2 44.14
Solyc04g025780.1.1 Tomato extracellular 18.4 43.67
Solyc05g005870.2.1 Tomato plasma membrane 42.67 43.01
PGSC0003DMT400097482 Potato extracellular, plasma membrane, plastid 20.27 39.38
CDY69634 Canola extracellular 7.73 33.72
CDY04005 Canola plasma membrane 32.0 32.7
CDY38468 Canola extracellular 10.13 32.2
CDY00140 Canola golgi, plasma membrane, vacuole 31.2 31.71
CDY20031 Canola plasma membrane 30.67 31.17
CDY13131 Canola plasma membrane, vacuole 14.67 31.07
CDY44581 Canola plasma membrane 27.47 30.84
CDX99640 Canola golgi, plasma membrane, vacuole 28.27 30.81
CDX95070 Canola plasma membrane 18.93 30.6
CDX72470 Canola plasma membrane 18.93 30.6
CDY44584 Canola golgi, plasma membrane, plastid 10.13 30.4
CDY15932 Canola golgi, nucleus, plasma membrane 29.33 30.3
CDX85184 Canola plasma membrane 29.33 30.3
CDY66864 Canola golgi, plasma membrane, vacuole 28.0 29.91
CDX99641 Canola plasma membrane 27.73 29.8
CDY53118 Canola plasma membrane 26.67 29.76
CDY15933 Canola plasma membrane 27.73 29.71
CDY11676 Canola golgi, plasma membrane, vacuole 28.8 29.51
CDY15931 Canola extracellular, mitochondrion, plasma membrane, vacuole 7.47 29.47
CDY36827 Canola golgi, plasma membrane, plastid 29.07 29.46
CDY49754 Canola plasma membrane 26.67 29.33
CDY11677 Canola golgi, nucleus, plasma membrane 28.27 28.49
CDY59916 Canola cytosol, plasma membrane, plastid 8.0 27.78
CDY11678 Canola plasma membrane 26.93 27.75
CDX85185 Canola golgi, plasma membrane, vacuole 26.4 27.65
CDX67449 Canola golgi, plasma membrane, vacuole 26.67 27.4
CDX86450 Canola plasma membrane 26.67 26.67
CDY11675 Canola golgi, nucleus, plasma membrane 20.0 26.22
CDX86451 Canola cytosol 29.33 24.72
CDY59918 Canola extracellular 8.53 24.43
CDY04006 Canola cytosol, peroxisome, plasma membrane 21.87 23.23
CDX67447 Canola plasma membrane 28.0 22.29
CDX99639 Canola plasma membrane 11.73 21.89
CDY36829 Canola plasma membrane 19.73 20.39
CDX67448 Canola plasma membrane 28.0 14.23
Protein Annotations
MapMan:24.2.1.5GO:A0A078HLN3UniProt:A0A078HLN3EnsemblPlants:CDY38802ProteinID:CDY38802ProteinID:CDY38802.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00066608001PFAM:PF00892
PANTHER:PTHR31218PANTHER:PTHR31218:SF61SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI00042D88FFInterPro:WAT1-related
SEG:seg:::::
Description
BnaA07g28740DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLN3]
Coordinates
chrLK032432:-:310648..313159
Molecular Weight (calculated)
42086.1 Da
IEP (calculated)
9.762
GRAVY (calculated)
0.457
Length
375 amino acids
Sequence
(BLAST)
001: MEVKGKKEKF VPFVSMVIME ACTIALTIMA KTAITGGMSP FVFVVYTNAF GSILLLPFSF FFHRNDRTEE SIFSWPLLVR VFFLGFTGIF LFQNLAFVGL
101: SFSSPIVVCA MGLLIPSFSF LLNLILGRSK LDWRNTSTRA KVMGTIISFS GAFVEELYKG PFIRPASSPS PTRLLKSIPK LLVYYTIPNN WFLGCIFLAA
201: AFFSVSLFNV IQTGTVKKYP HVMKVASFYS IVGTIQCIIF SLFMERDLSA WKIEPNFDLF LIIATGIFGN VIRPSIQVKC AQMKGPYYVP LFKPFGIFWA
301: TVFGTSFFVN SLRYGNVLGA AIGGVGYYSV SWGQLKETEE KQNPMEERKA IKPMHLHGED ENKVPLLINQ EESPV
Best Arabidopsis Sequence Match ( AT1G70260.1 )
(BLAST)
001: MEVKVRRDEL VPFVAMAIME ACTIALTIMA KTALTGGMSP FVFVVYTNAF GSILLLPFSF LFHRNERTEQ SIFSWPLLVR VFFLGFTGIF MFQNLAFVGL
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV
Arabidopsis Description
WAT1-related protein At1g70260 [Source:UniProtKB/Swiss-Prot;Acc:F4I5D5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.