Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY15932 | Canola | golgi, nucleus, plasma membrane | 75.41 | 76.03 |
CDX99640 | Canola | golgi, plasma membrane, vacuole | 70.77 | 75.29 |
CDY15931 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 19.4 | 74.74 |
CDY11677 | Canola | golgi, nucleus, plasma membrane | 74.86 | 73.66 |
CDY44581 | Canola | plasma membrane | 67.21 | 73.65 |
CDY36827 | Canola | golgi, plasma membrane, plastid | 74.04 | 73.24 |
CDY66864 | Canola | golgi, plasma membrane, vacuole | 69.67 | 72.65 |
CDY11678 | Canola | plasma membrane | 72.13 | 72.53 |
CDX67449 | Canola | golgi, plasma membrane, vacuole | 72.13 | 72.33 |
CDX99641 | Canola | plasma membrane | 68.85 | 72.21 |
CDY15933 | Canola | plasma membrane | 68.58 | 71.71 |
CDY11675 | Canola | golgi, nucleus, plasma membrane | 54.1 | 69.23 |
CDY38468 | Canola | extracellular | 21.86 | 67.8 |
CDX67447 | Canola | plasma membrane | 70.22 | 54.56 |
KRH46524 | Soybean | plasma membrane | 52.19 | 52.04 |
CDY36829 | Canola | plasma membrane | 51.09 | 51.52 |
VIT_14s0066g01640.t01 | Wine grape | plasma membrane | 49.45 | 50.42 |
CDX99639 | Canola | plasma membrane | 27.6 | 50.25 |
CDX67448 | Canola | plasma membrane | 90.98 | 45.12 |
CDY69634 | Canola | extracellular | 10.38 | 44.19 |
CDY44584 | Canola | golgi, plasma membrane, plastid | 15.03 | 44.0 |
CDY49754 | Canola | plasma membrane | 40.98 | 43.99 |
CDY00140 | Canola | golgi, plasma membrane, vacuole | 44.26 | 43.9 |
CDY20031 | Canola | plasma membrane | 43.99 | 43.63 |
CDY04005 | Canola | plasma membrane | 43.17 | 43.05 |
CDX85185 | Canola | golgi, plasma membrane, vacuole | 41.53 | 42.46 |
CDY13131 | Canola | plasma membrane, vacuole | 20.49 | 42.37 |
CDX86450 | Canola | plasma membrane | 43.17 | 42.13 |
CDX85184 | Canola | plasma membrane | 41.53 | 41.87 |
CDY53118 | Canola | plasma membrane | 37.7 | 41.07 |
CDX95070 | Canola | plasma membrane | 25.14 | 39.66 |
CDX72470 | Canola | plasma membrane | 25.14 | 39.66 |
CDY59916 | Canola | cytosol, plasma membrane, plastid | 11.48 | 38.89 |
CDX86451 | Canola | cytosol | 42.08 | 34.61 |
CDY59918 | Canola | extracellular | 11.2 | 31.3 |
CDY03759 | Canola | plasma membrane | 31.69 | 30.93 |
CDY42998 | Canola | golgi, plasma membrane | 31.42 | 30.67 |
CDX68349 | Canola | plasma membrane | 30.87 | 30.29 |
CDY61698 | Canola | plasma membrane | 30.6 | 30.03 |
CDY04006 | Canola | cytosol, peroxisome, plasma membrane | 28.69 | 29.75 |
CDY23506 | Canola | plasma membrane | 30.05 | 29.49 |
CDY38802 | Canola | golgi, plasma membrane, vacuole | 29.51 | 28.8 |
CDY65646 | Canola | extracellular, plasma membrane | 23.77 | 28.43 |
CDY11606 | Canola | plasma membrane | 29.78 | 23.19 |
Protein Annotations
MapMan:24.2.1.5 | GO:A0A078FEJ2 | UniProt:A0A078FEJ2 | EnsemblPlants:CDY11676 | ProteinID:CDY11676 | ProteinID:CDY11676.1 |
InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00049836001 | PFAM:PF00892 |
PANTHER:PTHR31218 | PANTHER:PTHR31218:SF48 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EF2621 | InterPro:WAT1-related |
SEG:seg | : | : | : | : | : |
Description
BnaC06g12840DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEJ2]
Coordinates
chrLK032013:-:255058..256757
Molecular Weight (calculated)
39852.3 Da
IEP (calculated)
9.315
GRAVY (calculated)
0.770
Length
366 amino acids
Sequence
(BLAST)
(BLAST)
001: MERGAEEKTV ALRYFCGDVV PFAAMVSVEC VTVGSNTLFK AATLRGLSFY VYIFYSYVVA TIVLLPLSLI FGRSRRLPSA KFPVFVKIFF LAILGLMSGL
101: VGLKGVEYSS PTLSSAISNL TPAFTFTLAI IFRIEQVRLR SSATQAKIIG TIVSISGALV VVLYKGHKVL TAAPSPSNIS LDQHLTSSNS SWMIGGLLLA
201: SQYFFISVWY IVQTKVMEAY PEEITVIFFY NLFATLISAP VCFFAERNLT SWVLKPDISL AAIIYSGVLL SSFGLAMHTW GLHLKGPVYI SLFKPLSIVI
301: AVILGAIFLG DALYLGSVIG SVILSLGFYT VIWGKAREDA TKTVTGSEQS PLLLTHVVED EALSLR
101: VGLKGVEYSS PTLSSAISNL TPAFTFTLAI IFRIEQVRLR SSATQAKIIG TIVSISGALV VVLYKGHKVL TAAPSPSNIS LDQHLTSSNS SWMIGGLLLA
201: SQYFFISVWY IVQTKVMEAY PEEITVIFFY NLFATLISAP VCFFAERNLT SWVLKPDISL AAIIYSGVLL SSFGLAMHTW GLHLKGPVYI SLFKPLSIVI
301: AVILGAIFLG DALYLGSVIG SVILSLGFYT VIWGKAREDA TKTVTGSEQS PLLLTHVVED EALSLR
001: MTRGAGGETV AWSYFCRDVV PFTAMVAVEC VTVGSNTLFK AATLRGLSFY VFVFYTYVVA TLVLLPLSLI FGRSKRLPSA KTPVFFNIFL LALVGFMSLI
101: VGCKGIEYSS PTLASAISNL TPAFTFTLAV IFRMEQIVLR SSATQAKIIG TIVSISGALV VILYKGPKVL TDASLTPPSP TISLYQHLTS FDSSWIIGGL
201: LLATQYLLVS VWYILQTRVM ELYPEEITVV FLYNLCATLI SAPVCLFAEK DLNSFILKPG VSLASVMYSG GLVSSFGSVI HTWGLHLKGP VYISLFKPLS
301: IVIAVAMGVM FLGDALYLGS VIGSLILSLG FYTVIWGKAR EDSIKTVAGT EQSPLLPSHT IEEEASLSCD
101: VGCKGIEYSS PTLASAISNL TPAFTFTLAV IFRMEQIVLR SSATQAKIIG TIVSISGALV VILYKGPKVL TDASLTPPSP TISLYQHLTS FDSSWIIGGL
201: LLATQYLLVS VWYILQTRVM ELYPEEITVV FLYNLCATLI SAPVCLFAEK DLNSFILKPG VSLASVMYSG GLVSSFGSVI HTWGLHLKGP VYISLFKPLS
301: IVIAVAMGVM FLGDALYLGS VIGSLILSLG FYTVIWGKAR EDSIKTVAGT EQSPLLPSHT IEEEASLSCD
Arabidopsis Description
WAT1-related protein At5g40230 [Source:UniProtKB/Swiss-Prot;Acc:F4KHA8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.