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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY15932 Canola golgi, nucleus, plasma membrane 75.41 76.03
CDX99640 Canola golgi, plasma membrane, vacuole 70.77 75.29
CDY15931 Canola extracellular, mitochondrion, plasma membrane, vacuole 19.4 74.74
CDY11677 Canola golgi, nucleus, plasma membrane 74.86 73.66
CDY44581 Canola plasma membrane 67.21 73.65
CDY36827 Canola golgi, plasma membrane, plastid 74.04 73.24
CDY66864 Canola golgi, plasma membrane, vacuole 69.67 72.65
CDY11678 Canola plasma membrane 72.13 72.53
CDX67449 Canola golgi, plasma membrane, vacuole 72.13 72.33
CDX99641 Canola plasma membrane 68.85 72.21
CDY15933 Canola plasma membrane 68.58 71.71
CDY11675 Canola golgi, nucleus, plasma membrane 54.1 69.23
CDY38468 Canola extracellular 21.86 67.8
CDX67447 Canola plasma membrane 70.22 54.56
KRH46524 Soybean plasma membrane 52.19 52.04
CDY36829 Canola plasma membrane 51.09 51.52
VIT_14s0066g01640.t01 Wine grape plasma membrane 49.45 50.42
CDX99639 Canola plasma membrane 27.6 50.25
CDX67448 Canola plasma membrane 90.98 45.12
CDY69634 Canola extracellular 10.38 44.19
CDY44584 Canola golgi, plasma membrane, plastid 15.03 44.0
CDY49754 Canola plasma membrane 40.98 43.99
CDY00140 Canola golgi, plasma membrane, vacuole 44.26 43.9
CDY20031 Canola plasma membrane 43.99 43.63
CDY04005 Canola plasma membrane 43.17 43.05
CDX85185 Canola golgi, plasma membrane, vacuole 41.53 42.46
CDY13131 Canola plasma membrane, vacuole 20.49 42.37
CDX86450 Canola plasma membrane 43.17 42.13
CDX85184 Canola plasma membrane 41.53 41.87
CDY53118 Canola plasma membrane 37.7 41.07
CDX95070 Canola plasma membrane 25.14 39.66
CDX72470 Canola plasma membrane 25.14 39.66
CDY59916 Canola cytosol, plasma membrane, plastid 11.48 38.89
CDX86451 Canola cytosol 42.08 34.61
CDY59918 Canola extracellular 11.2 31.3
CDY03759 Canola plasma membrane 31.69 30.93
CDY42998 Canola golgi, plasma membrane 31.42 30.67
CDX68349 Canola plasma membrane 30.87 30.29
CDY61698 Canola plasma membrane 30.6 30.03
CDY04006 Canola cytosol, peroxisome, plasma membrane 28.69 29.75
CDY23506 Canola plasma membrane 30.05 29.49
CDY38802 Canola golgi, plasma membrane, vacuole 29.51 28.8
CDY65646 Canola extracellular, plasma membrane 23.77 28.43
CDY11606 Canola plasma membrane 29.78 23.19
Protein Annotations
MapMan:24.2.1.5GO:A0A078FEJ2UniProt:A0A078FEJ2EnsemblPlants:CDY11676ProteinID:CDY11676ProteinID:CDY11676.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00049836001PFAM:PF00892
PANTHER:PTHR31218PANTHER:PTHR31218:SF48SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EF2621InterPro:WAT1-related
SEG:seg:::::
Description
BnaC06g12840DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEJ2]
Coordinates
chrLK032013:-:255058..256757
Molecular Weight (calculated)
39852.3 Da
IEP (calculated)
9.315
GRAVY (calculated)
0.770
Length
366 amino acids
Sequence
(BLAST)
001: MERGAEEKTV ALRYFCGDVV PFAAMVSVEC VTVGSNTLFK AATLRGLSFY VYIFYSYVVA TIVLLPLSLI FGRSRRLPSA KFPVFVKIFF LAILGLMSGL
101: VGLKGVEYSS PTLSSAISNL TPAFTFTLAI IFRIEQVRLR SSATQAKIIG TIVSISGALV VVLYKGHKVL TAAPSPSNIS LDQHLTSSNS SWMIGGLLLA
201: SQYFFISVWY IVQTKVMEAY PEEITVIFFY NLFATLISAP VCFFAERNLT SWVLKPDISL AAIIYSGVLL SSFGLAMHTW GLHLKGPVYI SLFKPLSIVI
301: AVILGAIFLG DALYLGSVIG SVILSLGFYT VIWGKAREDA TKTVTGSEQS PLLLTHVVED EALSLR
Best Arabidopsis Sequence Match ( AT5G40230.1 )
(BLAST)
001: MTRGAGGETV AWSYFCRDVV PFTAMVAVEC VTVGSNTLFK AATLRGLSFY VFVFYTYVVA TLVLLPLSLI FGRSKRLPSA KTPVFFNIFL LALVGFMSLI
101: VGCKGIEYSS PTLASAISNL TPAFTFTLAV IFRMEQIVLR SSATQAKIIG TIVSISGALV VILYKGPKVL TDASLTPPSP TISLYQHLTS FDSSWIIGGL
201: LLATQYLLVS VWYILQTRVM ELYPEEITVV FLYNLCATLI SAPVCLFAEK DLNSFILKPG VSLASVMYSG GLVSSFGSVI HTWGLHLKGP VYISLFKPLS
301: IVIAVAMGVM FLGDALYLGS VIGSLILSLG FYTVIWGKAR EDSIKTVAGT EQSPLLPSHT IEEEASLSCD
Arabidopsis Description
WAT1-related protein At5g40230 [Source:UniProtKB/Swiss-Prot;Acc:F4KHA8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.