CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	golgi, nucleus, plasma membrane, vacuole
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G40230.1	Thale cress	plasma membrane	74.93	71.08
CDY11675	Canola	golgi, nucleus, plasma membrane	57.27	70.28
CDY11676	Canola	golgi, plasma membrane, vacuole	72.65	69.67
CDX99641	Canola	plasma membrane	69.23	69.63
CDY15933	Canola	plasma membrane	69.23	69.43
CDY15932	Canola	golgi, nucleus, plasma membrane	71.23	68.87
CDY11678	Canola	plasma membrane	70.37	67.86
CDX99640	Canola	golgi, plasma membrane, vacuole	66.38	67.73
CDX67449	Canola	golgi, plasma membrane, vacuole	70.37	67.67
CDY15931	Canola	extracellular, mitochondrion, plasma membrane, vacuole	17.95	66.32
CDY44581	Canola	plasma membrane	62.96	66.17
CDY11677	Canola	golgi, nucleus, plasma membrane	69.23	65.32
CDY36827	Canola	golgi, plasma membrane, plastid	67.24	63.78
CDY38468	Canola	extracellular	20.51	61.02
CDX67447	Canola	plasma membrane	74.07	55.2
CDX99639	Canola	plasma membrane	28.21	49.25
KRH46524	Soybean	plasma membrane	51.0	48.77
VIT_14s0066g01640.t01	Wine grape	plasma membrane	47.58	46.52
CDY36829	Canola	plasma membrane	45.87	44.35
CDY44584	Canola	golgi, plasma membrane, plastid	15.67	44.0
CDY49754	Canola	plasma membrane	42.45	43.7
CDY13131	Canola	plasma membrane, vacuole	21.37	42.37
CDY53118	Canola	plasma membrane	40.17	41.96
CDY20031	Canola	plasma membrane	43.59	41.46
CDY00140	Canola	golgi, plasma membrane, vacuole	43.3	41.19
CDY59916	Canola	cytosol, plasma membrane, plastid	12.54	40.74
CDX85184	Canola	plasma membrane	41.88	40.5
CDY04005	Canola	plasma membrane	41.88	40.05
CDX85185	Canola	golgi, plasma membrane, vacuole	40.74	39.94
CDX95070	Canola	plasma membrane	26.21	39.66
CDX72470	Canola	plasma membrane	26.21	39.66
CDX86450	Canola	plasma membrane	41.88	39.2
CDY69634	Canola	extracellular	9.4	38.37
CDY59918	Canola	extracellular	13.11	35.11
CDX67448	Canola	plasma membrane	72.65	34.55
CDX86451	Canola	cytosol	41.6	32.81
CDX68349	Canola	plasma membrane	31.62	29.76
CDY04006	Canola	cytosol, peroxisome, plasma membrane	29.91	29.75
CDY03759	Canola	plasma membrane	31.62	29.6
CDY23506	Canola	plasma membrane	31.34	29.49
CDY61698	Canola	plasma membrane	31.34	29.49
CDY42998	Canola	golgi, plasma membrane	31.05	29.07
CDY38802	Canola	golgi, plasma membrane, vacuole	29.91	28.0
CDY65646	Canola	extracellular, plasma membrane	24.22	27.78
CDY11606	Canola	plasma membrane	29.91	22.34

Protein Annotations

MapMan:24.2.1.5	GO:A0A078JJH6	UniProt:A0A078JJH6	EnsemblPlants:CDY66864	ProteinID:CDY66864	ProteinID:CDY66864.1
InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00056730001	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EED259	InterPro:WAT1-related
SEG:seg	:	:	:	:	:

Description

BnaCnng52640DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJH6]

Coordinates

chrLK035531:+:10694..12273

Molecular Weight (calculated)

38281.6 Da

IEP (calculated)

9.773

GRAVY (calculated)

0.755

Length

351 amino acids

Sequence
(BLAST)

001: MRETVAWRYI NRDVVPFASM IVVECVTVGS TTLYKAAALR GLSFYVFVFY SYVVSTLVLL PLSLIYRRST RLPSAKSPVF FKIFLLALLG FMSMIAGCKG
101: VEYSSPTLAS AISTLTPAFT FTLAIVFRME RVRLRSSASQ AKIIGTVVSM SGALVVVLYK GPKLLAASHY HHLTLSESSW ILGGISLAAQ YLLISVWLII
201: QTRIMEVYPQ EITVVFLYSL CGTQISAPVC MFAEKNLTSF LLKPDVSLVS IMYTGALVSS LGTVIHTWGL HLKGPVYISL FKPLSIVIAV GMSAIFLGDA
301: IHLGSVIGSV VLSLGFYTVI WGKAREDASK PVTSSEHYSP LLLARTVADE S

Best Arabidopsis Sequence Match ( AT4G15540.2 )
(BLAST)

001: MREETVSWKY FKRDVVPFTA MIAIECTTVG SSILYKAATL RGFSFYVFVF YAYVGATLVL LLLSLIFGRS RSLPTAKSSL FFKIFLLALL GLTSRVAGCK
101: GIEYSSPTLS SAISNLTPAF TFILAIFFRM EQVMLRSSAT QAKIIGTIVS ISGALVIVLY KGPKLLVAAS FTSFESSWII GGLLLGLQFL LLSVWFILQT
201: HIMEIYPEEI AVVFCYNLCA TLISGTVCLL VEKDLNSWQL KPGFSLASVI YSGLFDTSLG SVIHTWGLHV KGPVYISLFK PLSIAIAVAM AAIFLGDTLH
301: LGSVIGSVIL SFGFYTVIWG KAREDSTKTV SDSEQSLLLP SHDREED

Arabidopsis Description

WAT1-related protein At4g15540 [Source:UniProtKB/Swiss-Prot;Acc:F4JK59]
SUBAcon: [plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.