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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • plasma membrane 3
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030338.1-P Field mustard plasma membrane 99.71 100.0
CDX99641 Canola plasma membrane 99.43 99.71
CDY38468 Canola extracellular 32.0 94.92
AT4G15540.1 Thale cress plasma membrane 84.57 85.3
CDY15932 Canola golgi, nucleus, plasma membrane 73.14 70.52
CDX99640 Canola golgi, plasma membrane, vacuole 68.29 69.48
CDX67449 Canola golgi, plasma membrane, vacuole 72.29 69.32
CDY66864 Canola golgi, plasma membrane, vacuole 69.43 69.23
CDY11678 Canola plasma membrane 71.71 68.96
CDY11676 Canola golgi, plasma membrane, vacuole 71.71 68.58
CDY11677 Canola golgi, nucleus, plasma membrane 72.86 68.55
CDY15931 Canola extracellular, mitochondrion, plasma membrane, vacuole 18.57 68.42
CDY44581 Canola plasma membrane 64.86 67.96
CDY11675 Canola golgi, nucleus, plasma membrane 54.86 67.13
CDY36827 Canola golgi, plasma membrane, plastid 68.86 65.14
CDX67447 Canola plasma membrane 71.14 52.87
CDX99639 Canola plasma membrane 29.43 51.24
KRH46524 Soybean plasma membrane 53.43 50.95
VIT_14s0066g01640.t01 Wine grape plasma membrane 49.43 48.19
CDY36829 Canola plasma membrane 46.86 45.18
CDY44584 Canola golgi, plasma membrane, plastid 15.43 43.2
CDY20031 Canola plasma membrane 44.86 42.55
CDY00140 Canola golgi, plasma membrane, vacuole 44.57 42.28
CDY69634 Canola extracellular 10.29 41.86
CDY04005 Canola plasma membrane 43.71 41.69
CDY53118 Canola plasma membrane 39.71 41.37
CDY49754 Canola plasma membrane 39.71 40.76
CDY13131 Canola plasma membrane, vacuole 20.29 40.11
CDX85185 Canola golgi, plasma membrane, vacuole 40.86 39.94
CDX85184 Canola plasma membrane 40.29 38.84
CDX86450 Canola plasma membrane 41.43 38.67
CDY59918 Canola extracellular 13.71 36.64
CDX72470 Canola plasma membrane 24.29 36.64
CDX95070 Canola plasma membrane 24.29 36.64
CDY59916 Canola cytosol, plasma membrane, plastid 10.57 34.26
CDX67448 Canola plasma membrane 71.71 34.01
CDX86451 Canola cytosol 40.86 32.13
CDY42998 Canola golgi, plasma membrane 31.43 29.33
CDY23506 Canola plasma membrane 30.86 28.95
CDX68349 Canola plasma membrane 30.86 28.95
CDY03759 Canola plasma membrane 30.86 28.8
CDY04006 Canola cytosol, peroxisome, plasma membrane 28.0 27.76
CDY38802 Canola golgi, plasma membrane, vacuole 29.71 27.73
CDY61698 Canola plasma membrane 29.43 27.61
CDY65646 Canola extracellular, plasma membrane 22.29 25.49
CDY11606 Canola plasma membrane 29.71 22.13
Protein Annotations
MapMan:24.2.1.5GO:A0A078FU76UniProt:A0A078FU76EnsemblPlants:CDY15933ProteinID:CDY15933ProteinID:CDY15933.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00090305001PFAM:PF00892
PANTHER:PTHR31218PANTHER:PTHR31218:SF48SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EEF787InterPro:WAT1-related
SEG:seg:::::
Description
BnaA04g11780DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078FU76]
Coordinates
chrLK032059:+:604275..606262
Molecular Weight (calculated)
38621.8 Da
IEP (calculated)
9.407
GRAVY (calculated)
0.726
Length
350 amino acids
Sequence
(BLAST)
001: MRETVAWRYF SRDVVPFAAM IAVECTTVGS STLFKAATLR GFSFYVFVFY SYVVATLVLF TLSLIFGSRK RRLPSAKSPL FFKIFLLTLL GLTSRIAGCK
101: GIEYSSPTLS SAISNLTPAF TFMLAVFFRM EQVMLRSSAT QAKIIGTIVS ISGALVIVLY KGPKLLVATS FTSFEPSWII GGLLLALQFL LLSVWYILQT
201: QIMEIYPEEI SVVLFYNMCA TLISALVCLF VERDLNSWKL KPGVSLVAVI YSGFFDTSLG SVIHTWGLHL KGPVYVSLFK PLSIAIAVAM ASIFLGDALH
301: LGSVVGSVIL SFGFYTVIWG KAREDTTKTI SDSEQSLLFP TQNREDETLS
Best Arabidopsis Sequence Match ( AT4G15540.2 )
(BLAST)
001: MREETVSWKY FKRDVVPFTA MIAIECTTVG SSILYKAATL RGFSFYVFVF YAYVGATLVL LLLSLIFGRS RSLPTAKSSL FFKIFLLALL GLTSRVAGCK
101: GIEYSSPTLS SAISNLTPAF TFILAIFFRM EQVMLRSSAT QAKIIGTIVS ISGALVIVLY KGPKLLVAAS FTSFESSWII GGLLLGLQFL LLSVWFILQT
201: HIMEIYPEEI AVVFCYNLCA TLISGTVCLL VEKDLNSWQL KPGFSLASVI YSGLFDTSLG SVIHTWGLHV KGPVYISLFK PLSIAIAVAM AAIFLGDTLH
301: LGSVIGSVIL SFGFYTVIWG KAREDSTKTV SDSEQSLLLP SHDREED
Arabidopsis Description
WAT1-related protein At4g15540 [Source:UniProtKB/Swiss-Prot;Acc:F4JK59]
SUBAcon: [golgi,nucleus,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.