Factsheet for Bra030338.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15933	Canola	plasma membrane	100.0	99.71
CDX99641	Canola	plasma membrane	99.71	99.71
CDY38468	Canola	extracellular	32.09	94.92
AT4G15540.1	Thale cress	plasma membrane	84.81	85.3
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	73.35	70.52
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	72.21	69.23
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	18.62	68.42
Bra025598.1-P	Field mustard	plasma membrane	42.12	54.65
Bra028450.1-P	Field mustard	plasma membrane	71.92	53.75
KRH46524	Soybean	plasma membrane	53.58	50.95
VIT_14s0066g01640.t01	Wine grape	plasma membrane	49.57	48.19
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	42.98	42.37
Bra033035.1-P	Field mustard	plasma membrane	44.41	42.23
Bra027523.1-P	Field mustard	plasma membrane, vacuole	20.34	40.11
Bra025321.1-P	Field mustard	plasma membrane	41.55	38.67
Bra033037.1-P	Field mustard	golgi, plasma membrane, vacuole	41.55	35.8
Bra028451.1-P	Field mustard	plasma membrane	71.35	33.6
Bra025320.1-P	Field mustard	cytosol	40.97	31.29
Bra003959.1-P	Field mustard	golgi, plasma membrane	30.95	28.95
Bra007904.1-P	Field mustard	golgi, plasma membrane	30.95	28.8
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	29.51	28.61
Bra027819.1-P	Field mustard	plasma membrane	29.8	27.88

Protein Annotations

EnsemblPlants:Bra030338.1	EnsemblPlants:Bra030338.1-P	EnsemblPlantsGene:Bra030338	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0002543A5E	UniProt:M4ENG8	MapMan:24.2.1.5	:

Description

AT4G15540 (E=2e-154) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: nodulin-related (TAIR:AT5G40230.1); Has 1698 Blast hits to 1688 proteins in 326 species: Archae - 14; Bacteria - 809; Metazoa - 6; Fungi - 0; Plants - 633; Viruses - 0; Other Eukaryotes - 236 (source: NCBI BLink).

Coordinates

chrA04:-:9022818..9024413

Molecular Weight (calculated)

38534.7 Da

IEP (calculated)

9.407

GRAVY (calculated)

0.731

Length

349 amino acids

Sequence
(BLAST)

001: MRETVAWRYF SRDVVPFAAM IAVECTTVGS STLFKAATLR GFSFYVFVFY SYVVATLVLF TLSLIFGRKR RLPSAKSPLF FKIFLLTLLG LTSRIAGCKG
101: IEYSSPTLSS AISNLTPAFT FMLAVFFRME QVMLRSSATQ AKIIGTIVSI SGALVIVLYK GPKLLVATSF TSFEPSWIIG GLLLALQFLL LSVWYILQTQ
201: IMEIYPEEIS VVLFYNMCAT LISALVCLFV ERDLNSWKLK PGVSLVAVIY SGFFDTSLGS VIHTWGLHLK GPVYVSLFKP LSIAIAVAMA SIFLGDALHL
301: GSVVGSVILS FGFYTVIWGK AREDTTKTIS DSEQSLLFPT QNREDETLS

Best Arabidopsis Sequence Match ( AT4G15540.2 )
(BLAST)

001: MREETVSWKY FKRDVVPFTA MIAIECTTVG SSILYKAATL RGFSFYVFVF YAYVGATLVL LLLSLIFGRS RSLPTAKSSL FFKIFLLALL GLTSRVAGCK
101: GIEYSSPTLS SAISNLTPAF TFILAIFFRM EQVMLRSSAT QAKIIGTIVS ISGALVIVLY KGPKLLVAAS FTSFESSWII GGLLLGLQFL LLSVWFILQT
201: HIMEIYPEEI AVVFCYNLCA TLISGTVCLL VEKDLNSWQL KPGFSLASVI YSGLFDTSLG SVIHTWGLHV KGPVYISLFK PLSIAIAVAM AAIFLGDTLH
301: LGSVIGSVIL SFGFYTVIWG KAREDSTKTV SDSEQSLLLP SHDREED

Arabidopsis Description

WAT1-related protein At4g15540 [Source:UniProtKB/Swiss-Prot;Acc:F4JK59]
SUBAcon: [plasma membrane,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.