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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 4
  • plasma membrane 5
  • endoplasmic reticulum 3
  • vacuole 4
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38802 Canola golgi, plasma membrane, vacuole 99.72 95.73
Bra003959.1-P Field mustard golgi, plasma membrane 87.5 84.45
Bra007904.1-P Field mustard golgi, plasma membrane 87.78 84.27
AT1G70260.1 Thale cress plasma membrane 84.72 81.33
CDY11606 Canola plasma membrane 97.22 74.47
Bra027819.1-P Field mustard plasma membrane 58.61 56.57
KRH53400 Soybean plasma membrane 48.33 48.33
KRH53402 Soybean extracellular, plasma membrane 47.5 46.98
VIT_01s0026g00550.t01 Wine grape golgi, plasma membrane 32.78 46.64
PGSC0003DMT400061666 Potato plasma membrane 42.78 41.96
Solyc04g025750.2.1 Tomato plasma membrane 42.5 41.69
Solyc05g005870.2.1 Tomato plasma membrane 41.67 40.32
PGSC0003DMT400097482 Potato extracellular, plasma membrane, plastid 21.39 39.9
Solyc04g025780.1.1 Tomato extracellular 16.67 37.97
Bra039062.1-P Field mustard extracellular, plasma membrane, vacuole 31.67 32.2
Bra033035.1-P Field mustard plasma membrane 32.78 32.15
Bra027523.1-P Field mustard plasma membrane, vacuole 15.28 31.07
Bra030338.1-P Field mustard plasma membrane 28.61 29.51
Bra030336.1-P Field mustard extracellular, mitochondrion, plasma membrane, vacuole 7.78 29.47
Bra030337.1-P Field mustard golgi, nucleus, plasma membrane 29.44 29.2
Bra028452.1-P Field mustard golgi, plasma membrane, vacuole 27.78 27.47
Bra025321.1-P Field mustard plasma membrane 27.22 26.13
Bra025598.1-P Field mustard plasma membrane 19.44 26.02
Bra025320.1-P Field mustard cytosol 29.72 23.41
Bra033037.1-P Field mustard golgi, plasma membrane, vacuole 25.83 22.96
Bra028450.1-P Field mustard plasma membrane 28.89 22.27
Bra028451.1-P Field mustard plasma membrane 28.89 14.04
Protein Annotations
EnsemblPlants:Bra016228.1EnsemblPlants:Bra016228.1-PEnsemblPlantsGene:Bra016228GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:EamA_domInterPro:WAT1-relatedPANTHER:PTHR31218PANTHER:PTHR31218:SF61PFAM:PF00892SEG:seg
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI000254198AUniProt:M4DIA1MapMan:24.2.1.5:
Description
AT1G70260 (E=3e-128) | nodulin MtN21 family protein
Coordinates
chrA07:-:18754321..18756405
Molecular Weight (calculated)
40400.0 Da
IEP (calculated)
9.932
GRAVY (calculated)
0.408
Length
360 amino acids
Sequence
(BLAST)
001: MEVKGKKEKF VPFVSMVIME ACTIALTIMA KTAITGGMSP FVFVVYTNAF GSILLLPFSF FFHRNDRTEE SIFSWPLLVR VFFLGFTGSP IVVCAMGLLI
101: PSFSFLLNLI LGRSKLDWRN TSTRAKVMGT IISFSGAFVE ELYKGPFIRP ASSPSPTRLL KSIPKLLVYY TIPNNWFLGC IFLAAAFFSV SLFNVIQTGT
201: VKKYPHVMKV ASFYSIVGTI QCIIFSLFME RDLSAWKIKP NFDLFLIIAT GIFGNVIRPS IQVKCAQMKG PYYVPLFKPF GIFWATVFGT SFFVNSLRYG
301: NVLGAAIGGV GYYSVSWGQL KETEEKQNPM EERKAIKPMH LHGEDENKVP LLINQEESPV
Best Arabidopsis Sequence Match ( AT1G70260.1 )
(BLAST)
001: MEVKVRRDEL VPFVAMAIME ACTIALTIMA KTALTGGMSP FVFVVYTNAF GSILLLPFSF LFHRNERTEQ SIFSWPLLVR VFFLGFTGIF MFQNLAFVGL
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV
Arabidopsis Description
WAT1-related protein At1g70260 [Source:UniProtKB/Swiss-Prot;Acc:F4I5D5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.