Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 4
- plasma membrane 5
- endoplasmic reticulum 3
- vacuole 4
- golgi 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY38802 | Canola | golgi, plasma membrane, vacuole | 99.72 | 95.73 |
Bra003959.1-P | Field mustard | golgi, plasma membrane | 87.5 | 84.45 |
Bra007904.1-P | Field mustard | golgi, plasma membrane | 87.78 | 84.27 |
AT1G70260.1 | Thale cress | plasma membrane | 84.72 | 81.33 |
CDY11606 | Canola | plasma membrane | 97.22 | 74.47 |
Bra027819.1-P | Field mustard | plasma membrane | 58.61 | 56.57 |
KRH53400 | Soybean | plasma membrane | 48.33 | 48.33 |
KRH53402 | Soybean | extracellular, plasma membrane | 47.5 | 46.98 |
VIT_01s0026g00550.t01 | Wine grape | golgi, plasma membrane | 32.78 | 46.64 |
PGSC0003DMT400061666 | Potato | plasma membrane | 42.78 | 41.96 |
Solyc04g025750.2.1 | Tomato | plasma membrane | 42.5 | 41.69 |
Solyc05g005870.2.1 | Tomato | plasma membrane | 41.67 | 40.32 |
PGSC0003DMT400097482 | Potato | extracellular, plasma membrane, plastid | 21.39 | 39.9 |
Solyc04g025780.1.1 | Tomato | extracellular | 16.67 | 37.97 |
Bra039062.1-P | Field mustard | extracellular, plasma membrane, vacuole | 31.67 | 32.2 |
Bra033035.1-P | Field mustard | plasma membrane | 32.78 | 32.15 |
Bra027523.1-P | Field mustard | plasma membrane, vacuole | 15.28 | 31.07 |
Bra030338.1-P | Field mustard | plasma membrane | 28.61 | 29.51 |
Bra030336.1-P | Field mustard | extracellular, mitochondrion, plasma membrane, vacuole | 7.78 | 29.47 |
Bra030337.1-P | Field mustard | golgi, nucleus, plasma membrane | 29.44 | 29.2 |
Bra028452.1-P | Field mustard | golgi, plasma membrane, vacuole | 27.78 | 27.47 |
Bra025321.1-P | Field mustard | plasma membrane | 27.22 | 26.13 |
Bra025598.1-P | Field mustard | plasma membrane | 19.44 | 26.02 |
Bra025320.1-P | Field mustard | cytosol | 29.72 | 23.41 |
Bra033037.1-P | Field mustard | golgi, plasma membrane, vacuole | 25.83 | 22.96 |
Bra028450.1-P | Field mustard | plasma membrane | 28.89 | 22.27 |
Bra028451.1-P | Field mustard | plasma membrane | 28.89 | 14.04 |
Protein Annotations
EnsemblPlants:Bra016228.1 | EnsemblPlants:Bra016228.1-P | EnsemblPlantsGene:Bra016228 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
InterPro:EamA_dom | InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF61 | PFAM:PF00892 | SEG:seg |
SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000254198A | UniProt:M4DIA1 | MapMan:24.2.1.5 | : |
Description
AT1G70260 (E=3e-128) | nodulin MtN21 family protein
Coordinates
chrA07:-:18754321..18756405
Molecular Weight (calculated)
40400.0 Da
IEP (calculated)
9.932
GRAVY (calculated)
0.408
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVKGKKEKF VPFVSMVIME ACTIALTIMA KTAITGGMSP FVFVVYTNAF GSILLLPFSF FFHRNDRTEE SIFSWPLLVR VFFLGFTGSP IVVCAMGLLI
101: PSFSFLLNLI LGRSKLDWRN TSTRAKVMGT IISFSGAFVE ELYKGPFIRP ASSPSPTRLL KSIPKLLVYY TIPNNWFLGC IFLAAAFFSV SLFNVIQTGT
201: VKKYPHVMKV ASFYSIVGTI QCIIFSLFME RDLSAWKIKP NFDLFLIIAT GIFGNVIRPS IQVKCAQMKG PYYVPLFKPF GIFWATVFGT SFFVNSLRYG
301: NVLGAAIGGV GYYSVSWGQL KETEEKQNPM EERKAIKPMH LHGEDENKVP LLINQEESPV
101: PSFSFLLNLI LGRSKLDWRN TSTRAKVMGT IISFSGAFVE ELYKGPFIRP ASSPSPTRLL KSIPKLLVYY TIPNNWFLGC IFLAAAFFSV SLFNVIQTGT
201: VKKYPHVMKV ASFYSIVGTI QCIIFSLFME RDLSAWKIKP NFDLFLIIAT GIFGNVIRPS IQVKCAQMKG PYYVPLFKPF GIFWATVFGT SFFVNSLRYG
301: NVLGAAIGGV GYYSVSWGQL KETEEKQNPM EERKAIKPMH LHGEDENKVP LLINQEESPV
001: MEVKVRRDEL VPFVAMAIME ACTIALTIMA KTALTGGMSP FVFVVYTNAF GSILLLPFSF LFHRNERTEQ SIFSWPLLVR VFFLGFTGIF MFQNLAFVGL
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV
Arabidopsis Description
WAT1-related protein At1g70260 [Source:UniProtKB/Swiss-Prot;Acc:F4I5D5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.