Factsheet for Bra025320.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86451	Canola	cytosol	97.37	100.0
AT3G28060.1	Thale cress	endoplasmic reticulum, mitochondrion, plasma membrane, plastid	26.26	77.42
Bra027523.1-P	Field mustard	plasma membrane, vacuole	22.1	57.06
Bra025321.1-P	Field mustard	plasma membrane	41.36	50.4
Bra033035.1-P	Field mustard	plasma membrane	40.26	50.14
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	38.07	49.15
Bra033037.1-P	Field mustard	golgi, plasma membrane, vacuole	41.79	47.16
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	8.97	43.16
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	33.92	42.7
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	33.04	41.48
Bra030338.1-P	Field mustard	plasma membrane	31.29	40.97
Bra028450.1-P	Field mustard	plasma membrane	33.7	32.98
Bra025598.1-P	Field mustard	plasma membrane	19.04	32.34
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	23.41	29.72
Bra007904.1-P	Field mustard	golgi, plasma membrane	24.29	29.6
Bra003959.1-P	Field mustard	golgi, plasma membrane	23.85	29.22
Bra027819.1-P	Field mustard	plasma membrane	22.98	28.15
Bra028451.1-P	Field mustard	plasma membrane	34.14	21.05

Protein Annotations

EnsemblPlants:Bra025320.1	EnsemblPlants:Bra025320.1-P	EnsemblPlantsGene:Bra025320	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF64	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI000253FBCE	UniProt:M4E964	MapMan:24.2.1.5	:

Description

AT3G28130 (E=7e-091) | nodulin MtN21 family protein

Coordinates

chrA06:-:22192882..22196260

Molecular Weight (calculated)

49594.9 Da

IEP (calculated)

8.049

GRAVY (calculated)

0.384

Length

457 amino acids

Sequence
(BLAST)

001: MCLNVVDLSL IRAKCNNDRV YTVMWGKAKE VPMVEDDNKA DDPIETGTDC PSSDNNIGQA PHEKSSRFRE SFQVPKEENQ TTMAGRLCQR DGWIMTAMVA
101: VVVSDVGMNT LFKAASSKGM SSYVFLVYSY GIGALLLLPS PFLTHRSGSL PPLKFSVLCK MGLLGLLGCV YLMLGYTGIK YSSPTLASAM SNLTPAFTFI
201: FALLFGKSLD DYFSCIISME KVSIKKNSSI AKVVGTIVSI VGALVVTLYH GPIIFAASQP SVHLPQPLSP PPSPPLNSNW VIGGCLLALE YTLIAISYII
301: QTHIMREYAS EFALALSHNI CVSVSCAFVS LFVETNNPSA WIMRSSIMLI CIVATGMVNS TGYVVESWTV RHKGPLFLAM FRPLAILTAV VLGAIFLGDS
401: LYLGSVIGGT LISIGFYTVM WGKAKEEKSE IDTHHAASSS HSKRVPLLMN YAAEKQV

Best Arabidopsis Sequence Match ( AT5G40210.1 )
(BLAST)

001: MVHGRLCNRD GWILTAMVVT EFSNVGVNTL VKAATSKGLS PFVVLVYSYT FGSLLLLPLT FFSFRSRSLP PLTFSILCNM GILGLIASAF QILGYNGIKY
101: SSPTLSSAMS NVNPAFTFIL AVVFRMENIS LGKKSSVAKV LGTILSIIGA LVVTLYHGPM LMSSHSDWII GGGLLALQYI LVSVSYLVMA HTMGRYPSAV
201: VVTLVHNVCI AVVCAFVSLL AEKDNPKAWV IRFDITLITV VATGILNSGY YVIHTWAVSH KGPVYLSMFK PLSILIAAVS TFIFLGESLY LGSVMGGILI
301: SIGFYMVLWG KAKEDKVDII GAIESSPSHN APLLDNFKS

Arabidopsis Description

WAT1-related protein At5g40210 [Source:UniProtKB/Swiss-Prot;Acc:Q945L4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.