Factsheet for Bra028450.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67447	Canola	plasma membrane	99.36	98.51
CDY11675	Canola	golgi, nucleus, plasma membrane	55.67	90.91
AT5G40230.1	Thale cress	plasma membrane	62.53	78.92
Bra030338.1-P	Field mustard	plasma membrane	53.75	71.92
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	53.53	68.68
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	53.32	68.59
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	12.85	63.16
Bra025598.1-P	Field mustard	plasma membrane	31.69	55.02
KRH46524	Soybean	plasma membrane	42.61	54.22
VIT_14s0066g01640.t01	Wine grape	plasma membrane	38.76	50.42
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	33.4	44.07
Bra033035.1-P	Field mustard	plasma membrane	34.05	43.32
Bra027523.1-P	Field mustard	plasma membrane, vacuole	15.2	40.11
Bra025321.1-P	Field mustard	plasma membrane	32.12	40.0
Bra033037.1-P	Field mustard	golgi, plasma membrane, vacuole	32.98	38.02
Bra028451.1-P	Field mustard	plasma membrane	54.39	34.28
Bra025320.1-P	Field mustard	cytosol	32.98	33.7
Bra007904.1-P	Field mustard	golgi, plasma membrane	24.63	30.67
Bra003959.1-P	Field mustard	golgi, plasma membrane	23.98	30.03
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	22.27	28.89
Bra027819.1-P	Field mustard	plasma membrane	22.7	28.42

Protein Annotations

EnsemblPlants:Bra028450.1	EnsemblPlants:Bra028450.1-P	EnsemblPlantsGene:Bra028450	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:EamA_dom	InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	PFAM:PF00892	SEG:seg
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00025432B4	UniProt:M4EI35	MapMan:24.2.1.5	:

Description

AT5G40230 (E=2e-143) | nodulin-related

Coordinates

chrA02:-:398831..402296

Molecular Weight (calculated)

51224.8 Da

IEP (calculated)

5.509

GRAVY (calculated)

0.523

Length

467 amino acids

Sequence
(BLAST)

001: MARGVEEEVA WRYFCRDVVP FTAMVAVECV TVGANTLFKA ATMRGLSFYV FVFYNYVIAT LVLLPLSLLF RRSRRLPSAK SSVFFKIFLL ALVGFMSVVA
101: GCKGLEYSSP TLASAISNLT PAFTFTLAII FRMEQVVLRS SATQAKIIGT IVSMSGALVV VLYKGPKILA SSTTVSHDQH LTISESSWII GGLLIAAQYL
201: LVSIWLILQT RIMEVYPEEI NVVFLYNLCA TLISAPVCLF ATKDLSSFLL KPGLPLASVM FSGGLVSSLG SVIHTWGLHL KGPVYISLFK PLSIVIAVAM
301: GSIFLGDALY LGSVVGSVIL SLGFYTVIWG KSREGSTRTV AVYIFNVIIL KEAANACSLC IMDETLSTHK VTCLIVHQFE LQTSIPLTTS LNFFDLAQVI
401: GTFWNGEDEV EEEENKNSGE EEEVDEKSGI GEKAERERGG ILVCVVGERR EVVSRRTDER VEDKEEE

Best Arabidopsis Sequence Match ( AT5G40230.1 )
(BLAST)

001: MTRGAGGETV AWSYFCRDVV PFTAMVAVEC VTVGSNTLFK AATLRGLSFY VFVFYTYVVA TLVLLPLSLI FGRSKRLPSA KTPVFFNIFL LALVGFMSLI
101: VGCKGIEYSS PTLASAISNL TPAFTFTLAV IFRMEQIVLR SSATQAKIIG TIVSISGALV VILYKGPKVL TDASLTPPSP TISLYQHLTS FDSSWIIGGL
201: LLATQYLLVS VWYILQTRVM ELYPEEITVV FLYNLCATLI SAPVCLFAEK DLNSFILKPG VSLASVMYSG GLVSSFGSVI HTWGLHLKGP VYISLFKPLS
301: IVIAVAMGVM FLGDALYLGS VIGSLILSLG FYTVIWGKAR EDSIKTVAGT EQSPLLPSHT IEEEASLSCD

Arabidopsis Description

WAT1-related protein At5g40230 [Source:UniProtKB/Swiss-Prot;Acc:F4KHA8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.