Factsheet for Bra025598.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44581	Canola	plasma membrane	74.35	59.88
CDY36827	Canola	golgi, plasma membrane, plastid	75.84	55.14
Bra030337.1-P	Field mustard	golgi, nucleus, plasma membrane	65.43	48.48
CDY36829	Canola	plasma membrane	62.08	46.01
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	61.71	45.6
Bra030338.1-P	Field mustard	plasma membrane	54.65	42.12
KRH46524	Soybean	plasma membrane	46.1	33.79
VIT_14s0066g01640.t01	Wine grape	plasma membrane	43.87	32.87
Bra028450.1-P	Field mustard	plasma membrane	55.02	31.69
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	35.32	26.84
Bra027523.1-P	Field mustard	plasma membrane, vacuole	17.47	26.55
Bra025321.1-P	Field mustard	plasma membrane	36.8	26.4
Bra033035.1-P	Field mustard	plasma membrane	35.32	25.89
Bra033037.1-P	Field mustard	golgi, plasma membrane, vacuole	36.06	23.95
Bra028451.1-P	Field mustard	plasma membrane	62.45	22.67
Bra007904.1-P	Field mustard	golgi, plasma membrane	27.14	19.47
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	26.02	19.44
Bra025320.1-P	Field mustard	cytosol	32.34	19.04
Bra027819.1-P	Field mustard	plasma membrane	24.54	17.69
Bra003959.1-P	Field mustard	golgi, plasma membrane	24.54	17.69
Bra030336.1-P	Field mustard	extracellular, mitochondrion, plasma membrane, vacuole	5.58	15.79

Protein Annotations

EnsemblPlants:Bra025598.1	EnsemblPlants:Bra025598.1-P	EnsemblPlantsGene:Bra025598	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:WAT1-related	PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002544D1C
UniProt:M4E9Z1	MapMan:24.2.1.5	:	:	:	:

Description

AT5G40240 (E=1e-046) | nodulin MtN21 family protein

Coordinates

chrA04:-:7586677..7591703

Molecular Weight (calculated)

29943.0 Da

IEP (calculated)

8.722

GRAVY (calculated)

0.709

Length

269 amino acids

Sequence
(BLAST)

001: MRRSGEDTVA WSYFHRDVVP FAAMFAVECS TVGSNTLYKA ATLRGLNFYV FIFYSYAAST LVLLPLSLIF GRMEQVVLRS SATQAKIIGG VLSISGALVI
101: VLYKGPKVLS AASFTPSSSP TSSLHQQLTS SESSWIVGGI LLASEFFLVS AWYIVQTLVM EVYPEEITVV FFYNLFATLV LAPICLLAER NLTSWVLKPD
201: ITLAAIIYSV TPPLSTLVTI ILVCKLYNWM IIGSWTSLLI WMLLVRHIGF RGNQNLYRTV EIMSQMYLP

Best Arabidopsis Sequence Match ( AT5G40230.1 )
(BLAST)

001: MTRGAGGETV AWSYFCRDVV PFTAMVAVEC VTVGSNTLFK AATLRGLSFY VFVFYTYVVA TLVLLPLSLI FGRSKRLPSA KTPVFFNIFL LALVGFMSLI
101: VGCKGIEYSS PTLASAISNL TPAFTFTLAV IFRMEQIVLR SSATQAKIIG TIVSISGALV VILYKGPKVL TDASLTPPSP TISLYQHLTS FDSSWIIGGL
201: LLATQYLLVS VWYILQTRVM ELYPEEITVV FLYNLCATLI SAPVCLFAEK DLNSFILKPG VSLASVMYSG GLVSSFGSVI HTWGLHLKGP VYISLFKPLS
301: IVIAVAMGVM FLGDALYLGS VIGSLILSLG FYTVIWGKAR EDSIKTVAGT EQSPLLPSHT IEEEASLSCD

Arabidopsis Description

WAT1-related protein At5g40230 [Source:UniProtKB/Swiss-Prot;Acc:F4KHA8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.