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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36827 Canola golgi, plasma membrane, plastid 93.71 84.59
Bra025598.1-P Field mustard plasma membrane 59.88 74.35
CDY15932 Canola golgi, nucleus, plasma membrane 76.65 70.52
CDY11677 Canola golgi, nucleus, plasma membrane 78.14 70.16
CDY38468 Canola extracellular 24.55 69.49
CDY11678 Canola plasma membrane 75.45 69.23
CDX67449 Canola golgi, plasma membrane, vacuole 74.85 68.49
CDX99640 Canola golgi, plasma membrane, vacuole 70.36 68.31
CDY11676 Canola golgi, plasma membrane, vacuole 73.65 67.21
CDX99641 Canola plasma membrane 68.26 65.33
CDY15933 Canola plasma membrane 67.96 64.86
CDY36829 Canola plasma membrane 69.16 63.64
CDY66864 Canola golgi, plasma membrane, vacuole 66.17 62.96
CDY11675 Canola golgi, nucleus, plasma membrane 53.29 62.24
CDY15931 Canola extracellular, mitochondrion, plasma membrane, vacuole 14.97 52.63
CDX99639 Canola plasma membrane 31.44 52.24
KRH46524 Soybean plasma membrane 54.79 49.86
CDY44584 Canola golgi, plasma membrane, plastid 18.26 48.8
CDX67447 Canola plasma membrane 66.17 46.92
VIT_14s0066g01640.t01 Wine grape plasma membrane 48.5 45.13
CDY69634 Canola extracellular 11.38 44.19
CDY00140 Canola golgi, plasma membrane, vacuole 44.91 40.65
CDY49754 Canola plasma membrane 41.32 40.47
CDY20031 Canola plasma membrane 44.61 40.38
CDY04005 Canola plasma membrane 44.01 40.05
CDX85185 Canola golgi, plasma membrane, vacuole 42.52 39.66
CDY53118 Canola plasma membrane 39.82 39.58
CDX86450 Canola plasma membrane 43.71 38.93
CDY59918 Canola extracellular 15.27 38.93
CDX85184 Canola plasma membrane 41.02 37.74
CDY13131 Canola plasma membrane, vacuole 19.76 37.29
CDX95070 Canola plasma membrane 24.85 35.78
CDX72470 Canola plasma membrane 24.85 35.78
CDX67448 Canola plasma membrane 73.65 33.33
CDX86451 Canola cytosol 41.02 30.79
CDY03759 Canola plasma membrane 33.53 29.87
CDY42998 Canola golgi, plasma membrane 32.93 29.33
CDY23506 Canola plasma membrane 32.04 28.69
CDX68349 Canola plasma membrane 32.04 28.69
CDY59916 Canola cytosol, plasma membrane, plastid 8.98 27.78
CDY04006 Canola cytosol, peroxisome, plasma membrane 29.04 27.48
CDY38802 Canola golgi, plasma membrane, vacuole 30.84 27.47
CDY61698 Canola plasma membrane 30.24 27.08
CDY65646 Canola extracellular, plasma membrane 22.46 24.51
CDY11606 Canola plasma membrane 31.14 22.13
Protein Annotations
MapMan:24.2.1.5GO:A0A078I3Z1UniProt:A0A078I3Z1EnsemblPlants:CDY44581ProteinID:CDY44581ProteinID:CDY44581.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00080502001PFAM:PF00892
PANTHER:PTHR31218PANTHER:PTHR31218:SF48SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EE98ABInterPro:WAT1-related
SEG:seg:::::
Description
BnaA04g10090DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3Z1]
Coordinates
chrLK032595:+:101451..103340
Molecular Weight (calculated)
36519.3 Da
IEP (calculated)
9.667
GRAVY (calculated)
0.790
Length
334 amino acids
Sequence
(BLAST)
001: MRRTGEETVA WRYFHRDVVP FAAMFVVECS TVGSNTLYKA ASLRGLNFYV FIFYSYAAST LVLLPLALIF GRSKKLPSAK SPLFFKMFLL GLFGCMAQMV
101: GFKGVEQSSP TLSSAMSNLT PAFTFTLAVI FRMEQVVLRS SATQAKIIGG VLSISGALVV VLYKGPKVLS AAIFTPSSSP TNSLHQQLTS SESSWIVGGL
201: LLASQFFLVS VWYIVQTLIM EVYPEEITVV FFYYLFATLI SAPICLLAER NLTSWVIKPD ITLVAIIYSG VFASLFSVIT HTWGLHLKGP VYVSLFRPLS
301: IAIAVAMGAI FLSDALHLGS VIGSVILYEG LSLR
Best Arabidopsis Sequence Match ( AT4G15540.2 )
(BLAST)
001: MREETVSWKY FKRDVVPFTA MIAIECTTVG SSILYKAATL RGFSFYVFVF YAYVGATLVL LLLSLIFGRS RSLPTAKSSL FFKIFLLALL GLTSRVAGCK
101: GIEYSSPTLS SAISNLTPAF TFILAIFFRM EQVMLRSSAT QAKIIGTIVS ISGALVIVLY KGPKLLVAAS FTSFESSWII GGLLLGLQFL LLSVWFILQT
201: HIMEIYPEEI AVVFCYNLCA TLISGTVCLL VEKDLNSWQL KPGFSLASVI YSGLFDTSLG SVIHTWGLHV KGPVYISLFK PLSIAIAVAM AAIFLGDTLH
301: LGSVIGSVIL SFGFYTVIWG KAREDSTKTV SDSEQSLLLP SHDREED
Arabidopsis Description
WAT1-related protein At4g15540 [Source:UniProtKB/Swiss-Prot;Acc:F4JK59]
SUBAcon: [plasma membrane,golgi,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.