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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 5
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030336.1-P Field mustard extracellular, mitochondrion, plasma membrane, vacuole 27.86 58.95
CDY15931 Canola extracellular, mitochondrion, plasma membrane, vacuole 27.86 58.95
CDY15932 Canola golgi, nucleus, plasma membrane 61.19 33.88
CDY11677 Canola golgi, nucleus, plasma membrane 58.71 31.72
AT5G40240.2 Thale cress plasma membrane 60.2 31.68
CDY44581 Canola plasma membrane 52.24 31.44
CDY36827 Canola golgi, plasma membrane, plastid 55.22 30.0
CDY11678 Canola plasma membrane 54.23 29.95
CDX67449 Canola golgi, plasma membrane, vacuole 53.73 29.59
CDX99641 Canola plasma membrane 51.24 29.51
CDY15933 Canola plasma membrane 51.24 29.43
CDY44584 Canola golgi, plasma membrane, plastid 17.91 28.8
CDX99640 Canola golgi, plasma membrane, vacuole 49.25 28.78
CDY66864 Canola golgi, plasma membrane, vacuole 49.25 28.21
CDY59916 Canola cytosol, plasma membrane, plastid 14.93 27.78
CDY11676 Canola golgi, plasma membrane, vacuole 50.25 27.6
KRH46524 Soybean plasma membrane 45.77 25.07
CDY59918 Canola extracellular 15.42 23.66
CDY00140 Canola golgi, plasma membrane, vacuole 42.29 23.04
CDY20031 Canola plasma membrane 42.29 23.04
CDY04005 Canola plasma membrane 41.79 22.89
VIT_14s0066g01640.t01 Wine grape plasma membrane 40.3 22.56
CDY53118 Canola plasma membrane 36.82 22.02
CDY11675 Canola golgi, nucleus, plasma membrane 30.85 21.68
CDY49754 Canola plasma membrane 36.32 21.41
CDX67447 Canola plasma membrane 49.25 21.02
CDX85185 Canola golgi, plasma membrane, vacuole 37.31 20.95
CDX86450 Canola plasma membrane 38.31 20.53
CDX85184 Canola plasma membrane 36.82 20.39
CDY13131 Canola plasma membrane, vacuole 17.91 20.34
CDY69634 Canola extracellular 7.96 18.6
CDX86451 Canola cytosol 36.82 16.63
CDX95070 Canola plasma membrane 18.91 16.38
CDX72470 Canola plasma membrane 18.91 16.38
CDY36829 Canola plasma membrane 28.36 15.7
CDX67448 Canola plasma membrane 50.25 13.69
CDY61698 Canola plasma membrane 25.37 13.67
CDY42998 Canola golgi, plasma membrane 24.88 13.33
CDY03759 Canola plasma membrane 24.88 13.33
CDY04006 Canola cytosol, peroxisome, plasma membrane 23.38 13.31
CDX68349 Canola plasma membrane 24.38 13.14
CDY23506 Canola plasma membrane 24.38 13.14
CDY65646 Canola extracellular, plasma membrane 19.4 12.75
CDY38468 Canola extracellular 7.46 12.71
CDY38802 Canola golgi, plasma membrane, vacuole 21.89 11.73
CDY11606 Canola plasma membrane 22.39 9.57
Protein Annotations
EnsemblPlants:CDX99639EnsemblPlantsGene:GSBRNA2T00108152001GO:A0A078EFS4GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857InterPro:WAT1-related
PANTHER:PTHR31218PANTHER:PTHR31218:SF48PFscan:PS51257ProteinID:CDX99639ProteinID:CDX99639.1SEG:seg
SignalP:SignalP-noTMSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EEE357MapMan:24.2.1.5:
Description
BnaC04g33960D
Coordinates
chrLK031912:+:572027..573733
Molecular Weight (calculated)
22117.5 Da
IEP (calculated)
8.949
GRAVY (calculated)
0.804
Length
201 amino acids
Sequence
(BLAST)
001: MREAREETLL CLCLLLLSCF NTCPSSTFPH LWKVKKIASS QVSSLLQAFL TWTSRIKIIH SCFNIKGHIC FLTSSCKGIE YSSPTLASAI SNLTPAFTFT
101: LAVIFRMEQV RLRSSAIFFS ISLVYSSDLY ISLAAIVYSG FFVSMFSALT HTWGLHLKGP VYVSLFRPLS IAIAVAMGAI FLGDALHLGS VIGSMILCFG
201: F
Best Arabidopsis Sequence Match ( AT5G40240.1 )
(BLAST)
001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.