CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane, vacuole
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67449	Canola	golgi, plasma membrane, vacuole	96.7	96.44
CDY15931	Canola	extracellular, mitochondrion, plasma membrane, vacuole	20.6	78.95
CDY15932	Canola	golgi, nucleus, plasma membrane	76.37	76.58
CDY36827	Canola	golgi, plasma membrane, plastid	77.2	75.95
CDY44581	Canola	plasma membrane	69.23	75.45
CDY11677	Canola	golgi, nucleus, plasma membrane	76.65	75.0
CDX99640	Canola	golgi, plasma membrane, vacuole	70.05	74.13
CDX99641	Canola	plasma membrane	69.23	72.21
CDY11676	Canola	golgi, plasma membrane, vacuole	72.53	72.13
CDY15933	Canola	plasma membrane	68.96	71.71
CDY38468	Canola	extracellular	23.08	71.19
CDY66864	Canola	golgi, plasma membrane, vacuole	67.86	70.37
CDY11675	Canola	golgi, nucleus, plasma membrane	53.3	67.83
CDX99639	Canola	plasma membrane	29.95	54.23
CDX67447	Canola	plasma membrane	68.68	53.08
CDY36829	Canola	plasma membrane	50.82	50.96
KRH46524	Soybean	plasma membrane	51.37	50.95
VIT_14s0066g01640.t01	Wine grape	plasma membrane	50.0	50.7
CDY44584	Canola	golgi, plasma membrane, plastid	15.66	45.6
CDY49754	Canola	plasma membrane	42.03	44.87
CDX85185	Canola	golgi, plasma membrane, vacuole	43.96	44.69
CDY69634	Canola	extracellular	10.44	44.19
CDX86450	Canola	plasma membrane	44.78	43.47
CDY00140	Canola	golgi, plasma membrane, vacuole	43.68	43.09
CDY20031	Canola	plasma membrane	43.68	43.09
CDY04005	Canola	plasma membrane	42.86	42.51
CDX85184	Canola	plasma membrane	41.48	41.6
CDY53118	Canola	plasma membrane	38.19	41.37
CDX95070	Canola	plasma membrane	25.82	40.52
CDX72470	Canola	plasma membrane	25.82	40.52
CDY13131	Canola	plasma membrane, vacuole	19.51	40.11
CDY59918	Canola	extracellular	13.74	38.17
CDX67448	Canola	plasma membrane	72.8	35.91
CDX86451	Canola	cytosol	42.31	34.61
CDY59916	Canola	cytosol, plasma membrane, plastid	10.16	34.26
CDY04006	Canola	cytosol, peroxisome, plasma membrane	29.67	30.59
CDX68349	Canola	plasma membrane	29.4	28.69
CDY03759	Canola	plasma membrane	29.4	28.53
CDY23506	Canola	plasma membrane	29.12	28.42
CDY42998	Canola	golgi, plasma membrane	29.12	28.27
CDY61698	Canola	plasma membrane	28.3	27.61
CDY38802	Canola	golgi, plasma membrane, vacuole	27.75	26.93
CDY65646	Canola	extracellular, plasma membrane	21.43	25.49
CDY11606	Canola	plasma membrane	27.75	21.49

Protein Annotations

MapMan:24.2.1.5	GO:A0A078FHW9	UniProt:A0A078FHW9	EnsemblPlants:CDY11678	ProteinID:CDY11678	ProteinID:CDY11678.1
InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00049839001	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EE1755	InterPro:WAT1-related
SEG:seg	:	:	:	:	:

Description

BnaC06g12860DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHW9]

Coordinates

chrLK032013:-:274338..275928

Molecular Weight (calculated)

39995.6 Da

IEP (calculated)

8.855

GRAVY (calculated)

0.770

Length

364 amino acids

Sequence
(BLAST)

001: MRGEETEAWM YFRRDVVPFA AMFAVECATV GSSTLYKAAT LRGLNFYVFI FYTYVISTLI LFPLSIIFGR SRRLPSVKSP LFFKILLLGL VGFMAVIAGC
101: KGIEYSSPTV SSAISNLTPA FTFTLAVIFR MENVRLRSSA TQAKIIGAIV SISGALVVVL YKGPTLFAAA SVSPTISLHQ HLSSSESSWI IGGLLITLHY
201: FLTSVWYILQ TRIMEIYPEE ITVVFLYNLC VTLISAPVCL LGERNFTSWI LKPDISLAAI MYSGVFVSVF SGLTHTWGLH LKGPVYISLF RPLSIVIVVA
301: MGAIFLGDAL HLGSVIGSVI LCIGFYTLIW GKAREDTAKN VAGSEHYSPL LLTHIIEDEA LPLR

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.