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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, nucleus, plasma membrane

Predictor Summary:
  • nucleus 2
  • golgi 2
  • extracellular 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, nucleus, plasma membrane
Any Predictor:golgi, nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:golgi
PProwler:secretory
WoLF PSORT:nucleus
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY38468 Canola extracellular 27.97 67.8
AT5G40230.1 Thale cress plasma membrane 79.37 61.35
CDY66864 Canola golgi, plasma membrane, vacuole 70.28 57.27
CDX67447 Canola plasma membrane 91.96 55.84
Bra028450.1-P Field mustard plasma membrane 90.91 55.67
CDX99641 Canola plasma membrane 67.13 55.01
CDY15933 Canola plasma membrane 67.13 54.86
CDX99640 Canola golgi, plasma membrane, vacuole 65.73 54.65
CDY11676 Canola golgi, plasma membrane, vacuole 69.23 54.1
CDY11678 Canola plasma membrane 67.83 53.3
CDY44581 Canola plasma membrane 62.24 53.29
CDY15932 Canola golgi, nucleus, plasma membrane 66.78 52.62
CDX67449 Canola golgi, plasma membrane, vacuole 67.13 52.6
CDY11677 Canola golgi, nucleus, plasma membrane 64.69 49.73
CDY44584 Canola golgi, plasma membrane, plastid 21.68 49.6
CDY69634 Canola extracellular 14.69 48.84
CDY36827 Canola golgi, plasma membrane, plastid 61.89 47.84
CDY36829 Canola plasma membrane 53.85 42.42
VIT_14s0066g01640.t01 Wine grape plasma membrane 48.25 38.44
KRH46524 Soybean plasma membrane 49.3 38.42
CDY49754 Canola plasma membrane 40.56 34.02
CDY00140 Canola golgi, plasma membrane, vacuole 43.01 33.33
CDY20031 Canola plasma membrane 43.01 33.33
CDY04005 Canola plasma membrane 42.31 32.97
CDY59918 Canola extracellular 15.04 32.82
CDX85185 Canola golgi, plasma membrane, vacuole 40.21 32.12
CDX85184 Canola plasma membrane 40.56 31.96
CDY53118 Canola plasma membrane 37.41 31.85
CDX86450 Canola plasma membrane 40.91 31.2
CDX99639 Canola plasma membrane 21.68 30.85
CDX86451 Canola cytosol 40.56 26.07
CDX67448 Canola plasma membrane 67.13 26.02
CDX95070 Canola plasma membrane 18.53 22.84
CDX72470 Canola plasma membrane 18.53 22.84
CDY61698 Canola plasma membrane 28.32 21.72
CDY38802 Canola golgi, plasma membrane, vacuole 26.22 20.0
CDY42998 Canola golgi, plasma membrane 26.22 20.0
CDY03759 Canola plasma membrane 26.22 20.0
CDX68349 Canola plasma membrane 25.87 19.84
CDY23506 Canola plasma membrane 25.52 19.57
CDY04006 Canola cytosol, peroxisome, plasma membrane 23.78 19.26
CDY13131 Canola plasma membrane, vacuole 11.89 19.21
CDY65646 Canola extracellular, plasma membrane 19.23 17.97
CDY11606 Canola plasma membrane 25.52 15.53
CDY15931 Canola extracellular, mitochondrion, plasma membrane, vacuole 2.45 7.37
CDY59916 Canola cytosol, plasma membrane, plastid 2.1 5.56
Protein Annotations
MapMan:24.2.1.5GO:A0A078FBB1UniProt:A0A078FBB1EnsemblPlants:CDY11675ProteinID:CDY11675ProteinID:CDY11675.1
InterPro:EamA_domGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00049835001PFAM:PF00892
PANTHER:PTHR31218PANTHER:PTHR31218:SF48SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EEFF5FInterPro:WAT1-related
SEG:seg:::::
Description
BnaC06g12830DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078FBB1]
Coordinates
chrLK032013:-:253430..254728
Molecular Weight (calculated)
31347.3 Da
IEP (calculated)
9.386
GRAVY (calculated)
0.895
Length
286 amino acids
Sequence
(BLAST)
001: MARGVEEEVA WKYFCRDVVP FTAMVAVECV TVGSNTLFKA ATMRGLSFYV FVFYNYVVAT LVLLPLSLLF RRSRRLPSAK SSVFFKIFLL ALVGFMSGIA
101: GCKGIEYSSP TLASAISNIT PAFTFTLAII FRMEQVVLRS SATQAKIIGT IVSMSGALVV VLYTGPKILA SSTTVSHDQH LTISESSWII GGLLIAAQYL
201: LVSIWLILQT RIMEVYPEEI TVVFLYNLCA TLISALVCLF STKDLSSFLL KPGLSHASVM FSVRIKPGML LTVVIALILT LCFREA
Best Arabidopsis Sequence Match ( AT4G15540.2 )
(BLAST)
001: MREETVSWKY FKRDVVPFTA MIAIECTTVG SSILYKAATL RGFSFYVFVF YAYVGATLVL LLLSLIFGRS RSLPTAKSSL FFKIFLLALL GLTSRVAGCK
101: GIEYSSPTLS SAISNLTPAF TFILAIFFRM EQVMLRSSAT QAKIIGTIVS ISGALVIVLY KGPKLLVAAS FTSFESSWII GGLLLGLQFL LLSVWFILQT
201: HIMEIYPEEI AVVFCYNLCA TLISGTVCLL VEKDLNSWQL KPGFSLASVI YSGLFDTSLG SVIHTWGLHV KGPVYISLFK PLSIAIAVAM AAIFLGDTLH
301: LGSVIGSVIL SFGFYTVIWG KAREDSTKTV SDSEQSLLLP SHDREED
Arabidopsis Description
WAT1-related protein At4g15540 [Source:UniProtKB/Swiss-Prot;Acc:F4JK59]
SUBAcon: [golgi,nucleus,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.