CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028452.1-P	Field mustard	golgi, plasma membrane, vacuole	98.08	98.35
CDY11678	Canola	plasma membrane	96.44	96.7
CDY15931	Canola	extracellular, mitochondrion, plasma membrane, vacuole	20.82	80.0
CDY15932	Canola	golgi, nucleus, plasma membrane	75.62	76.03
CDY36827	Canola	golgi, plasma membrane, plastid	76.71	75.68
CDY44581	Canola	plasma membrane	68.49	74.85
CDY11677	Canola	golgi, nucleus, plasma membrane	75.89	74.46
CDX99640	Canola	golgi, plasma membrane, vacuole	69.32	73.55
CDX99641	Canola	plasma membrane	69.59	72.78
CDY15933	Canola	plasma membrane	69.32	72.29
CDY11676	Canola	golgi, plasma membrane, vacuole	72.33	72.13
CDY38468	Canola	extracellular	23.01	71.19
CDY66864	Canola	golgi, plasma membrane, vacuole	67.67	70.37
CDY11675	Canola	golgi, nucleus, plasma membrane	52.6	67.13
CDX99639	Canola	plasma membrane	29.59	53.73
CDX67447	Canola	plasma membrane	68.49	53.08
KRH46524	Soybean	plasma membrane	52.05	51.77
CDY36829	Canola	plasma membrane	50.41	50.69
VIT_14s0066g01640.t01	Wine grape	plasma membrane	48.49	49.3
CDY44584	Canola	golgi, plasma membrane, plastid	16.44	48.0
CDY49754	Canola	plasma membrane	42.19	45.16
CDX85185	Canola	golgi, plasma membrane, vacuole	43.84	44.69
CDY69634	Canola	extracellular	10.41	44.19
CDX86450	Canola	plasma membrane	44.93	43.73
CDY00140	Canola	golgi, plasma membrane, vacuole	43.29	42.82
CDY20031	Canola	plasma membrane	43.29	42.82
CDY04005	Canola	plasma membrane	42.47	42.23
CDX85184	Canola	plasma membrane	41.92	42.15
CDY53118	Canola	plasma membrane	38.63	41.96
CDX95070	Canola	plasma membrane	25.48	40.09
CDX72470	Canola	plasma membrane	25.48	40.09
CDY13131	Canola	plasma membrane, vacuole	18.9	38.98
CDY59918	Canola	extracellular	13.97	38.93
CDX67448	Canola	plasma membrane	72.6	35.91
CDX86451	Canola	cytosol	42.74	35.06
CDY59916	Canola	cytosol, plasma membrane, plastid	9.86	33.33
CDY04006	Canola	cytosol, peroxisome, plasma membrane	29.59	30.59
CDY42998	Canola	golgi, plasma membrane	29.04	28.27
CDY03759	Canola	plasma membrane	29.04	28.27
CDY23506	Canola	plasma membrane	28.77	28.15
CDX68349	Canola	plasma membrane	28.77	28.15
CDY61698	Canola	plasma membrane	28.22	27.61
CDY38802	Canola	golgi, plasma membrane, vacuole	27.4	26.67
CDY65646	Canola	extracellular, plasma membrane	20.82	24.84
CDY11606	Canola	plasma membrane	27.67	21.49

Protein Annotations

MapMan:24.2.1.5	GO:A0A078BUT1	EnsemblPlants:CDX67449	ProteinID:CDX67449	ProteinID:CDX67449.1	InterPro:EamA_dom
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00098552001	PFAM:PF00892	PANTHER:PTHR31218
PANTHER:PTHR31218:SF48	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EE2AF1	InterPro:WAT1-related	SEG:seg

Description

BnaA07g14890D

Coordinates

chrLK031787:-:314173..315760

Molecular Weight (calculated)

40158.0 Da

IEP (calculated)

9.193

GRAVY (calculated)

0.757

Length

365 amino acids

Sequence
(BLAST)

001: MRGEETEAWR YFRRDVVPFA AMFAVECATV GSSTLYKAAT LRGLNLYVFI FYTYVISTLI LLPLSIIFGR SRRLPSVKSP LFFKILLLGL VGYFMAVLAG
101: CKGIEYSSPT LSSAISNLTP AFTFILAVIF RMENVRLKSS ATQAKIIGAI VSISGALVVV LYKGPTLFAA ASVSPTISLH KHLTSSESSW IIGGLLITLH
201: YFLTSVWYIL QTRIMEIYPE EITVVFLYNL CVTLISAPVC LLGERNFTSW ILKPDVSLAA IMYSGVFVTV FSGLTHTWGL HLKGPVYISL FRPLSIVIVV
301: AMGAIFLGDA LHLGSVIGSV ILCIGFYTLI WGKAREDTTK NVAGSEHYSP LLLTHIIEDE ALPLR

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.