Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86451 | Canola | cytosol | 96.69 | 78.88 |
| AT3G28060.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 33.06 | 77.42 |
| CDY44584 | Canola | golgi, plasma membrane, plastid | 20.66 | 60.0 |
| CDY13131 | Canola | plasma membrane, vacuole | 27.82 | 57.06 |
| CDY53118 | Canola | plasma membrane | 51.79 | 55.95 |
| CDY49754 | Canola | plasma membrane | 51.79 | 55.13 |
| CDY69634 | Canola | extracellular | 12.95 | 54.65 |
| CDY59918 | Canola | extracellular | 19.01 | 52.67 |
| CDY59916 | Canola | cytosol, plasma membrane, plastid | 15.43 | 51.85 |
| CDX85185 | Canola | golgi, plasma membrane, vacuole | 50.69 | 51.4 |
| CDX86450 | Canola | plasma membrane | 52.34 | 50.67 |
| CDX95070 | Canola | plasma membrane | 32.23 | 50.43 |
| CDX72470 | Canola | plasma membrane | 32.23 | 50.43 |
| CDY00140 | Canola | golgi, plasma membrane, vacuole | 50.69 | 49.86 |
| CDY20031 | Canola | plasma membrane | 50.69 | 49.86 |
| CDY04005 | Canola | plasma membrane | 50.41 | 49.86 |
| CDX99640 | Canola | golgi, plasma membrane, vacuole | 41.05 | 43.31 |
| CDY15931 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 11.02 | 42.11 |
| CDX67449 | Canola | golgi, plasma membrane, vacuole | 42.15 | 41.92 |
| CDY66864 | Canola | golgi, plasma membrane, vacuole | 40.5 | 41.88 |
| CDY15932 | Canola | golgi, nucleus, plasma membrane | 41.87 | 41.87 |
| CDY11676 | Canola | golgi, plasma membrane, vacuole | 41.87 | 41.53 |
| CDY11678 | Canola | plasma membrane | 41.6 | 41.48 |
| CDY44581 | Canola | plasma membrane | 37.74 | 41.02 |
| CDY11677 | Canola | golgi, nucleus, plasma membrane | 41.6 | 40.59 |
| CDY11675 | Canola | golgi, nucleus, plasma membrane | 31.96 | 40.56 |
| CDX99641 | Canola | plasma membrane | 38.84 | 40.4 |
| CDY15933 | Canola | plasma membrane | 38.84 | 40.29 |
| CDY36827 | Canola | golgi, plasma membrane, plastid | 40.77 | 40.0 |
| CDY38468 | Canola | extracellular | 12.67 | 38.98 |
| CDY04006 | Canola | cytosol, peroxisome, plasma membrane | 36.91 | 37.96 |
| CDX99639 | Canola | plasma membrane | 20.39 | 36.82 |
| CDX67447 | Canola | plasma membrane | 41.87 | 32.27 |
| CDY23506 | Canola | plasma membrane | 31.13 | 30.29 |
| CDY42998 | Canola | golgi, plasma membrane | 30.58 | 29.6 |
| CDY03759 | Canola | plasma membrane | 30.58 | 29.6 |
| CDY38802 | Canola | golgi, plasma membrane, vacuole | 30.3 | 29.33 |
| CDX68349 | Canola | plasma membrane | 30.03 | 29.22 |
| CDY61698 | Canola | plasma membrane | 29.2 | 28.42 |
| CDY36829 | Canola | plasma membrane | 28.1 | 28.1 |
| CDY65646 | Canola | extracellular, plasma membrane | 21.76 | 25.82 |
| CDY11606 | Canola | plasma membrane | 29.75 | 22.98 |
| CDX67448 | Canola | plasma membrane | 42.15 | 20.73 |
Protein Annotations
| EnsemblPlants:CDX85184 | EnsemblPlantsGene:GSBRNA2T00142788001 | GO:A0A078DA90 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | InterPro:EamA_dom |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF64 | PFAM:PF00892 | ProteinID:CDX85184 | ProteinID:CDX85184.1 |
| SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EACCA1 | MapMan:24.2.1.5 | : |
Description
BnaC07g24950D
Coordinates
chrLK031841:+:16988..19973
Molecular Weight (calculated)
39098.6 Da
IEP (calculated)
9.497
GRAVY (calculated)
0.607
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRFCQRDG WIMTAMVAVV VSDVGMNTLF KAASSKGMSS YVFLVYSYGI GALLLLPSPF LAHRSRSLPP LKFSVLCKMG LLGLLGCVYL MLGYTGIKYS
101: SPTLASAMSN LTPAFTFIFA LLFGMEKVSI KKNSSFAKVV GTLVSIVGAL VVTLYHGPII FAASQPSVYL PQPLSPPPSP PSNSNWVTGG CLLALEYTLI
201: AISYIIQTHI MREYPSEFAL ALSHNICVSV SCASVSLFVE KNNPSAWIMR SSIMLICIVA TGMVNSTGYV VESWTVRHKG PLFLAMFRPL AILTAVVLGA
301: IFLGDSLYLG SVIGGTLISI GFYTVMWGKA KEEKSDIDTH HAASSSHSKR VPLLMNYAAE KQV
101: SPTLASAMSN LTPAFTFIFA LLFGMEKVSI KKNSSFAKVV GTLVSIVGAL VVTLYHGPII FAASQPSVYL PQPLSPPPSP PSNSNWVTGG CLLALEYTLI
201: AISYIIQTHI MREYPSEFAL ALSHNICVSV SCASVSLFVE KNNPSAWIMR SSIMLICIVA TGMVNSTGYV VESWTVRHKG PLFLAMFRPL AILTAVVLGA
301: IFLGDSLYLG SVIGGTLISI GFYTVMWGKA KEEKSDIDTH HAASSSHSKR VPLLMNYAAE KQV
001: MVHGRLCNRD GWILTAMVVT EFSNVGVNTL VKAATSKGLS PFVVLVYSYT FGSLLLLPLT FFSFRSRSLP PLTFSILCNM GILGLIASAF QILGYNGIKY
101: SSPTLSSAMS NVNPAFTFIL AVVFRMENIS LGKKSSVAKV LGTILSIIGA LVVTLYHGPM LMSSHSDWII GGGLLALQYI LVSVSYLVMA HTMGRYPSAV
201: VVTLVHNVCI AVVCAFVSLL AEKDNPKAWV IRFDITLITV VATGILNSGY YVIHTWAVSH KGPVYLSMFK PLSILIAAVS TFIFLGESLY LGSVMGGILI
301: SIGFYMVLWG KAKEDKVDII GAIESSPSHN APLLDNFKS
101: SSPTLSSAMS NVNPAFTFIL AVVFRMENIS LGKKSSVAKV LGTILSIIGA LVVTLYHGPM LMSSHSDWII GGGLLALQYI LVSVSYLVMA HTMGRYPSAV
201: VVTLVHNVCI AVVCAFVSLL AEKDNPKAWV IRFDITLITV VATGILNSGY YVIHTWAVSH KGPVYLSMFK PLSILIAAVS TFIFLGESLY LGSVMGGILI
301: SIGFYMVLWG KAKEDKVDII GAIESSPSHN APLLDNFKS
Arabidopsis Description
WAT1-related protein At5g40210 [Source:UniProtKB/Swiss-Prot;Acc:Q945L4]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.