CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus, plasma membrane
Any Predictor:	golgi, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15931	Canola	extracellular, mitochondrion, plasma membrane, vacuole	21.51	84.21
CDY15932	Canola	golgi, nucleus, plasma membrane	80.38	82.37
CDX99640	Canola	golgi, plasma membrane, vacuole	75.27	81.4
AT5G40240.2	Thale cress	plasma membrane	80.38	78.27
CDY44581	Canola	plasma membrane	70.16	78.14
CDY36827	Canola	golgi, plasma membrane, plastid	76.61	77.03
CDY11678	Canola	plasma membrane	75.0	76.65
CDX67449	Canola	golgi, plasma membrane, vacuole	74.46	75.89
CDY11676	Canola	golgi, plasma membrane, vacuole	73.66	74.86
CDX99641	Canola	plasma membrane	68.82	73.35
CDY15933	Canola	plasma membrane	68.55	72.86
CDY38468	Canola	extracellular	22.58	71.19
CDY66864	Canola	golgi, plasma membrane, vacuole	65.32	69.23
CDY11675	Canola	golgi, nucleus, plasma membrane	49.73	64.69
CDX99639	Canola	plasma membrane	31.72	58.71
KRH46524	Soybean	plasma membrane	50.81	51.5
CDY36829	Canola	plasma membrane	50.0	51.24
CDX67447	Canola	plasma membrane	64.78	51.17
VIT_14s0066g01640.t01	Wine grape	plasma membrane	47.58	49.3
CDY44584	Canola	golgi, plasma membrane, plastid	16.4	48.8
CDY69634	Canola	extracellular	10.75	46.51
CDY00140	Canola	golgi, plasma membrane, vacuole	44.35	44.72
CDY49754	Canola	plasma membrane	40.59	44.28
CDY20031	Canola	plasma membrane	43.82	44.17
CDY04005	Canola	plasma membrane	42.74	43.32
CDX85185	Canola	golgi, plasma membrane, vacuole	40.86	42.46
CDX86450	Canola	plasma membrane	42.2	41.87
CDY53118	Canola	plasma membrane	37.63	41.67
CDX85184	Canola	plasma membrane	40.59	41.6
CDY13131	Canola	plasma membrane, vacuole	19.35	40.68
CDY59918	Canola	extracellular	13.98	39.69
CDX72470	Canola	plasma membrane	24.19	38.79
CDX95070	Canola	plasma membrane	24.19	38.79
CDX67448	Canola	plasma membrane	76.08	38.35
CDY59916	Canola	cytosol, plasma membrane, plastid	10.22	35.19
CDX86451	Canola	cytosol	41.94	35.06
CDY03759	Canola	plasma membrane	30.38	30.13
CDX68349	Canola	plasma membrane	30.11	30.03
CDY23506	Canola	plasma membrane	30.11	30.03
CDY61698	Canola	plasma membrane	30.11	30.03
CDY42998	Canola	golgi, plasma membrane	30.11	29.87
CDY04006	Canola	cytosol, peroxisome, plasma membrane	27.96	29.46
CDY65646	Canola	extracellular, plasma membrane	23.39	28.43
CDY38802	Canola	golgi, plasma membrane, vacuole	28.49	28.27
CDY11606	Canola	plasma membrane	28.23	22.34

Protein Annotations

MapMan:24.2.1.5	GO:A0A078FFB5	UniProt:A0A078FFB5	EnsemblPlants:CDY11677	ProteinID:CDY11677	ProteinID:CDY11677.1
InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00049838001	PFAM:PF00892
PANTHER:PTHR31218	PANTHER:PTHR31218:SF48	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EE9F08	InterPro:WAT1-related
SEG:seg	:	:	:	:	:

Description

BnaC06g12850DWAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A078FFB5]

Coordinates

chrLK032013:-:271988..273949

Molecular Weight (calculated)

40750.4 Da

IEP (calculated)

9.230

GRAVY (calculated)

0.713

Length

372 amino acids

Sequence
(BLAST)

001: MRGAGEETVA WRYLSRDVVP FAAMFTAECA IVGSNTLFKA ATLRGLSFYV FVFYSYLVST LLLLPLCFIF GRSKRLPQSK SPLFFKILLV GLLGFISQIA
101: GCKGIEYSSP TLSSAISNLT PAFTFTLAVI FRMEQVRLRS SGTQAKIIGA VISISGALVI VLYKGPKVLP AASFTSSSPP TISLHQQQMT SFESSWIIGG
201: LLLASQYFLI SFMYILQTMI MEAYPEEIRV VFFYNLIATL ISAPVCFFAE TNLTSWVLKP DISLAAIIYS GVFVSLFTAL THTWGLHLKG PVYVSLFRPL
301: SIAIAVSMGA IFLGTALHLG SVIGSVILSF GFYTVIWGKT RENSTKAVAG CEHSPLLLTH VVEDEHLLVR YD

Best Arabidopsis Sequence Match ( AT5G40240.3 )
(BLAST)

001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.