Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44584 | Canola | golgi, plasma membrane, plastid | 48.84 | 33.6 |
| CDY59918 | Canola | extracellular | 38.37 | 25.19 |
| Bra033035.1-P | Field mustard | plasma membrane | 100.0 | 23.43 |
| CDY04005 | Canola | plasma membrane | 98.84 | 23.16 |
| AT3G28050.1 | Thale cress | plasma membrane | 91.86 | 21.53 |
| CDY20031 | Canola | plasma membrane | 90.7 | 21.14 |
| CDY00140 | Canola | golgi, plasma membrane, vacuole | 89.53 | 20.87 |
| Solyc02g087060.2.1 | Tomato | golgi, plasma membrane, vacuole | 69.77 | 16.48 |
| CDY11675 | Canola | golgi, nucleus, plasma membrane | 48.84 | 14.69 |
| VIT_14s0066g01650.t01 | Wine grape | golgi, plasma membrane, vacuole | 54.65 | 13.06 |
| CDX85184 | Canola | plasma membrane | 54.65 | 12.95 |
| KRG88846 | Soybean | plasma membrane | 55.81 | 12.94 |
| CDX85185 | Canola | golgi, plasma membrane, vacuole | 53.49 | 12.85 |
| KRH75315 | Soybean | plasma membrane | 54.65 | 12.81 |
| CDX86450 | Canola | plasma membrane | 55.81 | 12.8 |
| CDY53118 | Canola | plasma membrane | 48.84 | 12.5 |
| CDY49754 | Canola | plasma membrane | 48.84 | 12.32 |
| CDY44581 | Canola | plasma membrane | 44.19 | 11.38 |
| CDX99640 | Canola | golgi, plasma membrane, vacuole | 45.35 | 11.34 |
| CDY11677 | Canola | golgi, nucleus, plasma membrane | 46.51 | 10.75 |
| CDY15932 | Canola | golgi, nucleus, plasma membrane | 45.35 | 10.74 |
| CDY11678 | Canola | plasma membrane | 44.19 | 10.44 |
| CDX67449 | Canola | golgi, plasma membrane, vacuole | 44.19 | 10.41 |
| CDY11676 | Canola | golgi, plasma membrane, vacuole | 44.19 | 10.38 |
| CDX86451 | Canola | cytosol | 53.49 | 10.34 |
| CDX99641 | Canola | plasma membrane | 41.86 | 10.32 |
| CDY15933 | Canola | plasma membrane | 41.86 | 10.29 |
| CDY36827 | Canola | golgi, plasma membrane, plastid | 43.02 | 10.0 |
| CDY36829 | Canola | plasma membrane | 41.86 | 9.92 |
| CDY66864 | Canola | golgi, plasma membrane, vacuole | 38.37 | 9.4 |
| CDX67447 | Canola | plasma membrane | 47.67 | 8.7 |
| CDY23506 | Canola | plasma membrane | 37.21 | 8.58 |
| CDX68349 | Canola | plasma membrane | 34.88 | 8.04 |
| CDY61698 | Canola | plasma membrane | 34.88 | 8.04 |
| CDX99639 | Canola | plasma membrane | 18.6 | 7.96 |
| CDY38802 | Canola | golgi, plasma membrane, vacuole | 33.72 | 7.73 |
| CDY42998 | Canola | golgi, plasma membrane | 33.72 | 7.73 |
| CDY03759 | Canola | plasma membrane | 33.72 | 7.73 |
| CDY11606 | Canola | plasma membrane | 32.56 | 5.96 |
| CDX67448 | Canola | plasma membrane | 44.19 | 5.15 |
| CDY04006 | Canola | cytosol, peroxisome, plasma membrane | 15.12 | 3.68 |
| CDY65646 | Canola | extracellular, plasma membrane | 2.33 | 0.65 |
| CDY38468 | Canola | extracellular | 0.0 | 0.0 |
| CDX72470 | Canola | plasma membrane | 0.0 | 0.0 |
| CDY15931 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 0.0 | 0.0 |
| CDY13131 | Canola | plasma membrane, vacuole | 0.0 | 0.0 |
| CDY59916 | Canola | cytosol, plasma membrane, plastid | 0.0 | 0.0 |
| CDX95070 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY69634 | EnsemblPlantsGene:GSBRNA2T00089549001 | GO:A0A078JS24 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF64 | ProteinID:CDY69634 | ProteinID:CDY69634.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0004EE2276 | UniProt:A0A078JS24 | MapMan:24.2.1.5 | : | : |
Description
BnaAnng31070DBnaAnng31070D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JS24]
Coordinates
chrLK039919:+:2626..3279
Molecular Weight (calculated)
9650.3 Da
IEP (calculated)
10.110
GRAVY (calculated)
0.845
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MTRKYFQREV LPVTALVIME CANVGLNTLF KAATLQGMGF HVFIVYSYGL AALLLLPSLF FSYRSRTLPP MNFSILYKVV LLGLIG
001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.