Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- golgi 4
- plasma membrane 7
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G28050.1 | KRH09922 | AT3G16310.1 | 21798944 |
| AT3G28050.1 | KRH23409 | AT3G16310.1 | 21798944 |
| AT3G28050.1 | KRH65384 | AT3G60600.1 | 21798944 |
| AT3G28050.1 | KRH76164 | AT3G60600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH75315 | Soybean | plasma membrane | 94.88 | 95.91 |
| Solyc02g087060.2.1 | Tomato | golgi, plasma membrane, vacuole | 60.92 | 62.09 |
| KRH18613 | Soybean | plasma membrane | 60.92 | 60.59 |
| KRG93364 | Soybean | plasma membrane | 60.92 | 60.59 |
| KRG93361 | Soybean | plasma membrane | 57.68 | 58.47 |
| AT3G28050.1 | Thale cress | plasma membrane | 57.68 | 58.31 |
| Bra033035.1-P | Field mustard | plasma membrane | 57.14 | 57.77 |
| CDY04005 | Canola | plasma membrane | 57.14 | 57.77 |
| CDY00140 | Canola | golgi, plasma membrane, vacuole | 57.41 | 57.72 |
| CDY20031 | Canola | plasma membrane | 57.14 | 57.45 |
| Bra039062.1-P | Field mustard | extracellular, plasma membrane, vacuole | 54.72 | 57.34 |
| CDY69634 | Canola | extracellular | 12.94 | 55.81 |
| KRG93356 | Soybean | plasma membrane | 47.98 | 54.1 |
| KRH13199 | Soybean | endoplasmic reticulum, extracellular, plastid | 15.36 | 47.11 |
| KRH46524 | Soybean | plasma membrane | 46.36 | 46.87 |
| KRH63359 | Soybean | extracellular, plasma membrane, vacuole | 9.97 | 43.02 |
| KRH69519 | Soybean | golgi, plasma membrane, vacuole | 40.16 | 42.69 |
| KRH53403 | Soybean | plasma membrane | 39.08 | 41.43 |
| KRH64529 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 38.27 | 40.57 |
| KRH74638 | Soybean | golgi, plasma membrane, plastid | 37.74 | 39.66 |
| KRH03336 | Soybean | endoplasmic reticulum, plasma membrane | 39.62 | 39.62 |
| KRH03335 | Soybean | plasma membrane | 26.68 | 39.6 |
| KRH74643 | Soybean | plasma membrane | 36.66 | 39.19 |
| KRH69514 | Soybean | plasma membrane | 36.93 | 39.03 |
| KRH69515 | Soybean | golgi, plasma membrane, plastid | 37.2 | 38.87 |
| KRH74641 | Soybean | plasma membrane | 16.71 | 38.75 |
| KRH26178 | Soybean | plasma membrane | 17.79 | 38.37 |
| KRH57038 | Soybean | extracellular, golgi, mitochondrion, plastid | 22.37 | 37.73 |
| KRH53406 | Soybean | golgi, plasma membrane, vacuole | 35.58 | 37.71 |
| KRH74642 | Soybean | plasma membrane | 27.22 | 37.41 |
| KRH64531 | Soybean | golgi, plasma membrane, vacuole | 35.04 | 37.04 |
| KRH74640 | Soybean | plasma membrane | 19.14 | 36.98 |
| KRH00038 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 32.61 | 36.34 |
| KRH57037 | Soybean | plasma membrane | 36.39 | 35.81 |
| KRH53400 | Soybean | plasma membrane | 33.42 | 34.44 |
| KRH04697 | Soybean | plasma membrane, vacuole | 24.8 | 33.7 |
| KRH15684 | Soybean | extracellular, plasma membrane, vacuole | 8.36 | 33.7 |
| KRG90314 | Soybean | extracellular, plasma membrane, vacuole | 8.36 | 33.7 |
| KRH53402 | Soybean | extracellular, plasma membrane | 32.88 | 33.52 |
| KRH54612 | Soybean | extracellular, plasma membrane, vacuole | 8.09 | 32.61 |
| KRH71873 | Soybean | extracellular, plasma membrane, vacuole | 7.82 | 31.52 |
| KRH37955 | Soybean | cytosol, nucleus, peroxisome | 15.63 | 30.85 |
Protein Annotations
| EntrezGene:100814137 | MapMan:24.2.1.5 | EMBL:BT096657 | UniProt:C6TGA7 | EnsemblPlantsGene:GLYMA_U023000 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlants:KRG88846 | ProteinID:KRG88846 |
| ProteinID:KRG88846.1 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF64 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0001B16A29 |
| InterPro:WAT1-related | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chrscaffold_22:-:492119..495651
Molecular Weight (calculated)
40237.1 Da
IEP (calculated)
9.262
GRAVY (calculated)
0.711
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKRVFLYKD LVPFGAMVTM ECLNVALNTL FKAATLRGMS YHVFVVYAYA VAAIVLIPGP FISQRCRSRV LPPLSFPLLR KIGLLGLIGC ASQIVGYTGI
101: SFSSPTLSSA ISNLVPAFTF LLAIIFRMEK VIVRNTTCQA KVLGTIVSIT GAFVVTFYKG PPIIIVHTPS LSLHQPINTL NSVDRSWAIG GLLLTAEYIL
201: VPLWYIVQVQ IMKVYPNELT VIFFYNLCVS IMAAIVAIFT ETNAGAWKIG LDTALASIVC SGIFGSFVNN AVHTWVLRIK GPVYVAMFKP LSIAIAVALG
301: VMFLGDTLHL GSLVGATVIS IGFYTVMWGK ATEENVDEDV PGQQSPPTTE NVPLLQSYKT DTAEKKMHGS V
101: SFSSPTLSSA ISNLVPAFTF LLAIIFRMEK VIVRNTTCQA KVLGTIVSIT GAFVVTFYKG PPIIIVHTPS LSLHQPINTL NSVDRSWAIG GLLLTAEYIL
201: VPLWYIVQVQ IMKVYPNELT VIFFYNLCVS IMAAIVAIFT ETNAGAWKIG LDTALASIVC SGIFGSFVNN AVHTWVLRIK GPVYVAMFKP LSIAIAVALG
301: VMFLGDTLHL GSLVGATVIS IGFYTVMWGK ATEENVDEDV PGQQSPPTTE NVPLLQSYKT DTAEKKMHGS V
001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.