Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033035.1-P | Field mustard | plasma membrane | 92.64 | 92.64 |
| CDY69634 | Canola | extracellular | 21.53 | 91.86 |
| CDY04005 | Canola | plasma membrane | 91.55 | 91.55 |
| CDY00140 | Canola | golgi, plasma membrane, vacuole | 91.01 | 90.51 |
| CDY20031 | Canola | plasma membrane | 90.46 | 89.97 |
| Bra039062.1-P | Field mustard | extracellular, plasma membrane, vacuole | 86.65 | 89.83 |
| Solyc02g087060.2.1 | Tomato | golgi, plasma membrane, vacuole | 63.22 | 63.74 |
| VIT_14s0066g01650.t01 | Wine grape | golgi, plasma membrane, vacuole | 57.49 | 58.61 |
| KRG88846 | Soybean | plasma membrane | 58.31 | 57.68 |
| KRH75315 | Soybean | plasma membrane | 57.49 | 57.49 |
| AT3G28080.1 | Thale cress | golgi, plasma membrane, vacuole | 49.86 | 51.12 |
| AT3G28100.1 | Thale cress | plasma membrane | 48.5 | 50.42 |
| AT3G28070.1 | Thale cress | golgi, plasma membrane, plastid, vacuole | 48.5 | 49.44 |
| AT3G28130.2 | Thale cress | plasma membrane | 47.41 | 49.01 |
| AT5G40210.1 | Thale cress | plasma membrane | 44.41 | 48.08 |
| AT5G40230.1 | Thale cress | plasma membrane | 45.78 | 45.41 |
| AT5G40240.2 | Thale cress | plasma membrane | 47.14 | 45.29 |
| AT4G15540.1 | Thale cress | plasma membrane | 41.96 | 44.38 |
| AT3G28060.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 17.71 | 41.94 |
| AT1G70260.1 | Thale cress | plasma membrane | 33.79 | 33.07 |
| AT1G60050.1 | Thale cress | plasma membrane | 30.79 | 30.21 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:822429 | UniProt:A0A178VL75 | ProteinID:AEE77395.1 | EMBL:AF372936 | ArrayExpress:AT3G28050 |
| EnsemblPlantsGene:AT3G28050 | RefSeq:AT3G28050 | TAIR:AT3G28050 | RefSeq:AT3G28050-TAIR-G | EnsemblPlants:AT3G28050.1 | TAIR:AT3G28050.1 |
| EMBL:AY088415 | EMBL:AY133520 | ProteinID:BAB01127.1 | InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | RefSeq:NP_566831.1 | ProteinID:OAP06524.1 | PFAM:PF00892 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF64 | UniProt:Q94JU2 | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI00000A46CA | InterPro:WAT1-related | SEG:seg | : | : | : |
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
Coordinates
chr3:+:10442608..10445431
Molecular Weight (calculated)
40058.4 Da
IEP (calculated)
8.528
GRAVY (calculated)
0.586
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.