Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G28070.1 | Thale cress | golgi, plasma membrane, plastid, vacuole | 85.47 | 85.0 |
| AT3G28100.1 | Thale cress | plasma membrane | 83.8 | 84.99 |
| CDY49754 | Canola | plasma membrane | 74.58 | 78.3 |
| CDX95070 | Canola | plasma membrane | 49.72 | 76.72 |
| CDX72470 | Canola | plasma membrane | 49.72 | 76.72 |
| CDX85185 | Canola | golgi, plasma membrane, vacuole | 74.58 | 74.58 |
| CDX86450 | Canola | plasma membrane | 76.26 | 72.8 |
| Bra025321.1-P | Field mustard | plasma membrane | 76.26 | 72.8 |
| Bra033037.1-P | Field mustard | golgi, plasma membrane, vacuole | 76.54 | 67.65 |
| AT3G28130.2 | Thale cress | plasma membrane | 67.04 | 67.61 |
| CDY04006 | Canola | cytosol, peroxisome, plasma membrane | 56.42 | 57.22 |
| AT5G40210.1 | Thale cress | plasma membrane | 50.84 | 53.69 |
| AT3G28050.1 | Thale cress | plasma membrane | 51.12 | 49.86 |
| AT3G28060.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 18.99 | 43.87 |
| AT5G40230.1 | Thale cress | plasma membrane | 42.46 | 41.08 |
| AT4G15540.1 | Thale cress | plasma membrane | 39.66 | 40.92 |
| AT5G40240.2 | Thale cress | plasma membrane | 42.18 | 39.53 |
| AT1G60050.1 | Thale cress | plasma membrane | 28.49 | 27.27 |
| AT1G70260.1 | Thale cress | plasma membrane | 28.21 | 26.93 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:822432 | EMBL:AB028616 | ProteinID:AEE77400.1 | ProteinID:AEE77401.1 | ArrayExpress:AT3G28080 |
| EnsemblPlantsGene:AT3G28080 | RefSeq:AT3G28080 | TAIR:AT3G28080 | RefSeq:AT3G28080-TAIR-G | EnsemblPlants:AT3G28080.1 | TAIR:AT3G28080.1 |
| EMBL:AY064026 | EMBL:AY084349 | EMBL:AY117190 | InterPro:EamA_dom | UniProt:F4IYZ0 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | RefSeq:NP_566832.1 | RefSeq:NP_850642.1 |
| PFAM:PF00892 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR31218 | PANTHER:PTHR31218:SF64 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0000163591 | InterPro:WAT1-related |
| SEG:seg | : | : | : | : | : |
Description
WAT1-related protein At3g28080 [Source:UniProtKB/Swiss-Prot;Acc:F4IYZ0]
Coordinates
chr3:+:10451466..10455317
Molecular Weight (calculated)
39244.1 Da
IEP (calculated)
10.053
GRAVY (calculated)
0.769
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGAVSLWRR EAVFLTAMLA GETSIVGLST LFKVATSKGL NIYPFLSYSY LLASLLLLPS LFFTNRSRSL PPLSASILSK IGLLGFLGSM YVITGGIGIE
101: YSNPTLASAI GNIVPALTFI LAVIFRMEKV SFKERSSVAK VMGTILSLIG AFVVIFYHGP RVFVASSPPY LNFRQLSPPL SSSKSDWLIG GAILTIQGIF
201: VSVSFILQTH IMREYPEAFT VSILYILCIS IVTSMIGLVV EKNNPSIWII HFDITLFTIV TTGIITSVYY VIHSWAIRHK RPLYLAIFKP LSILIAVVMG
301: TIFLNDSLYL GCLIGGILIT LGFYVVMWGK ANEEKNKLLS FSGKEKTPLL LSGKNDQI
101: YSNPTLASAI GNIVPALTFI LAVIFRMEKV SFKERSSVAK VMGTILSLIG AFVVIFYHGP RVFVASSPPY LNFRQLSPPL SSSKSDWLIG GAILTIQGIF
201: VSVSFILQTH IMREYPEAFT VSILYILCIS IVTSMIGLVV EKNNPSIWII HFDITLFTIV TTGIITSVYY VIHSWAIRHK RPLYLAIFKP LSILIAVVMG
301: TIFLNDSLYL GCLIGGILIT LGFYVVMWGK ANEEKNKLLS FSGKEKTPLL LSGKNDQI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.