Skip to main content
crop-pal logo
Thale cress
Search for another protein from :
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:golgi
Predotar:mitochondrion
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G28100.1 Thale cress plasma membrane 69.3 69.69
AT3G28080.1 Thale cress golgi, plasma membrane, vacuole 67.61 67.04
AT3G28070.1 Thale cress golgi, plasma membrane, plastid, vacuole 67.04 66.11
AT5G40210.1 Thale cress plasma membrane 51.83 54.28
AT3G28050.1 Thale cress plasma membrane 49.01 47.41
AT3G28060.1 Thale cress endoplasmic reticulum, mitochondrion, plasma membrane, plastid 19.15 43.87
AT5G40230.1 Thale cress plasma membrane 45.35 43.51
AT4G15540.1 Thale cress plasma membrane 41.97 42.94
AT5G40240.2 Thale cress plasma membrane 45.35 42.15
AT1G70260.1 Thale cress plasma membrane 27.89 26.4
AT1G60050.1 Thale cress plasma membrane 26.48 25.13
Protein Annotations
MapMan:24.2.1.5EntrezGene:822437ProteinID:AEE77405.1ProteinID:AEE77406.1EMBL:AK221781ProteinID:ANM63345.1
ArrayExpress:AT3G28130EnsemblPlantsGene:AT3G28130RefSeq:AT3G28130TAIR:AT3G28130RefSeq:AT3G28130-TAIR-GEnsemblPlants:AT3G28130.2
TAIR:AT3G28130.2EMBL:AY049278EMBL:AY129493Unigene:At.5490ProteinID:BAB01133.1InterPro:EamA_dom
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085RefSeq:NP_001325438.1
RefSeq:NP_566833.1RefSeq:NP_974371.2PFAM:PF00892PO:PO:0000013PO:PO:0000037PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020030PO:PO:0020038PO:PO:0020100
PO:PO:0020137PO:PO:0025022PO:PO:0025281PANTHER:PTHR31218PANTHER:PTHR31218:SF64UniProt:Q56X95
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI00004FF7A2InterPro:WAT1-relatedSEG:seg:
Description
WAT1-related protein At3g28130 [Source:UniProtKB/Swiss-Prot;Acc:Q56X95]
Coordinates
chr3:+:10465260..10468922
Molecular Weight (calculated)
38688.3 Da
IEP (calculated)
9.613
GRAVY (calculated)
0.757
Length
355 amino acids
Sequence
(BLAST)
001: MASITLRRRD AVLLTAMLAT ETGNVAMNTL FKAATSKGLN SYTFLIYSYL IGSIVLLPSH IFSYRSRSLP SLSLSILCKI GVLGLLGSTY LITGFIGIEY
101: SNPTLASAIS NINPAITFIL AIIFRMEKAS FKEKSSVAKM VGTIVSLVGA LVVVLYHGPR VFTPSSPPFP QLRQLLLPLS SSNSDWIIGG CLLAIKDTLV
201: PVAFILQAHI MKLYPAPFTV SFFYFLIASI LTSLIGIVAE KNNPSIWIIH FDITLVCIVV GGIFNPGYYA IHLWAVRNKG PVYLAIFRPL SILIAVIMGA
301: IFLGDSFYLG SLVGGILISL GFYTVMWGKA KEGKTQFLSL SEETPLLDEN IDDRI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.