Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY61698 | Canola | plasma membrane | 91.18 | 91.42 |
| Bra027819.1-P | Field mustard | plasma membrane | 90.91 | 91.15 |
| CDY65646 | Canola | extracellular, plasma membrane | 71.39 | 87.25 |
| AT1G70260.1 | Thale cress | plasma membrane | 58.56 | 58.4 |
| VIT_01s0026g00550.t01 | Wine grape | golgi, plasma membrane | 30.21 | 44.66 |
| KRH53400 | Soybean | plasma membrane | 42.78 | 44.44 |
| KRH53402 | Soybean | extracellular, plasma membrane | 41.18 | 42.31 |
| PGSC0003DMT400061666 | Potato | plasma membrane | 41.18 | 41.96 |
| Solyc04g025750.2.1 | Tomato | plasma membrane | 40.91 | 41.69 |
| Solyc05g005870.2.1 | Tomato | plasma membrane | 41.44 | 41.67 |
| Solyc04g025780.1.1 | Tomato | extracellular | 16.84 | 39.87 |
| PGSC0003DMT400097482 | Potato | extracellular, plasma membrane, plastid | 19.79 | 38.34 |
| AT3G28050.1 | Thale cress | plasma membrane | 30.21 | 30.79 |
| AT5G40240.2 | Thale cress | plasma membrane | 30.21 | 29.58 |
| AT5G40210.1 | Thale cress | plasma membrane | 26.74 | 29.5 |
| AT4G15540.1 | Thale cress | plasma membrane | 27.27 | 29.39 |
| AT5G40230.1 | Thale cress | plasma membrane | 28.88 | 29.19 |
| AT3G28080.1 | Thale cress | golgi, plasma membrane, vacuole | 27.27 | 28.49 |
| AT3G28100.1 | Thale cress | plasma membrane | 25.67 | 27.2 |
| AT3G28070.1 | Thale cress | golgi, plasma membrane, plastid, vacuole | 25.67 | 26.67 |
| AT3G28130.2 | Thale cress | plasma membrane | 25.13 | 26.48 |
| AT3G28060.1 | Thale cress | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 10.43 | 25.16 |
Protein Annotations
| MapMan:24.2.1.5 | EntrezGene:842299 | UniProt:A0A178WGH0 | ProteinID:AAD14481.1 | ProteinID:AEE33653.1 | ArrayExpress:AT1G60050 |
| EnsemblPlantsGene:AT1G60050 | RefSeq:AT1G60050 | TAIR:AT1G60050 | RefSeq:AT1G60050-TAIR-G | EnsemblPlants:AT1G60050.1 | TAIR:AT1G60050.1 |
| InterPro:EamA_dom | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 |
| RefSeq:NP_176213.1 | ProteinID:OAP17478.1 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF61 | UniProt:Q9ZUI8 |
| TMHMM:TMhelix | UniParc:UPI00000A3DF9 | InterPro:WAT1-related | SEG:seg | : | : |
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178WGH0]
Coordinates
chr1:-:22121375..22123881
Molecular Weight (calculated)
41137.4 Da
IEP (calculated)
5.679
GRAVY (calculated)
0.478
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MGLMDTRWET IVPFIVMALM EACTIALTIL AKTALTGGMS PFVFIVYTNA LGSLLLLPYS FYFHRDESDD EPFLTKPSLV RIFLLGFTGV FLFQNMAFLG
101: LSYSSPIVVC AMGLQSPAFS FLLSLALGKE GGLGWASKRT KGRVIGTLIC FTGAFVEVIY LGPFIRPSPP SSPTSNFLTT ISHYLTFFKN SDNWALGSLL
201: LACATLSISI WNIIQLDTVQ KYPQVMKVVS AYSLAGTLQC AIFSAFMEPD LSAWELKLNM DLYLIIATGI FGSIIRTSVQ VKCSKMKGPY YVPLFKPFGI
301: LWASIFGTSF FVNSLHYGSV LGAAIAGTGY LLIMWSQVQK DDPNETVEKN DNHQLDSDEQ TTPLLLANGD FDQV
101: LSYSSPIVVC AMGLQSPAFS FLLSLALGKE GGLGWASKRT KGRVIGTLIC FTGAFVEVIY LGPFIRPSPP SSPTSNFLTT ISHYLTFFKN SDNWALGSLL
201: LACATLSISI WNIIQLDTVQ KYPQVMKVVS AYSLAGTLQC AIFSAFMEPD LSAWELKLNM DLYLIIATGI FGSIIRTSVQ VKCSKMKGPY YVPLFKPFGI
301: LWASIFGTSF FVNSLHYGSV LGAAIAGTGY LLIMWSQVQK DDPNETVEKN DNHQLDSDEQ TTPLLLANGD FDQV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.