Factsheet for Solyc04g025750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400061666	Potato	plasma membrane	92.64	92.64
Solyc04g025780.1.1	Tomato	extracellular	39.24	91.14
Solyc05g005870.2.1	Tomato	plasma membrane	71.93	70.97
VIT_01s0026g00550.t01	Wine grape	golgi, plasma membrane	32.7	47.43
CDY42998	Canola	golgi, plasma membrane	46.05	45.07
Bra007904.1-P	Field mustard	golgi, plasma membrane	45.78	44.8
CDY03759	Canola	plasma membrane	45.78	44.8
Bra003959.1-P	Field mustard	golgi, plasma membrane	45.5	44.77
CDX68349	Canola	plasma membrane	45.23	44.5
CDY23506	Canola	plasma membrane	44.96	44.24
KRH53400	Soybean	plasma membrane	42.51	43.33
CDY38802	Canola	golgi, plasma membrane, vacuole	44.14	43.2
AT1G70260.1	Thale cress	plasma membrane	43.87	42.93
Bra016228.1-P	Field mustard	extracellular, plasma membrane, vacuole	41.69	42.5
KRH53402	Soybean	extracellular, plasma membrane	41.42	41.76
CDY61698	Canola	plasma membrane	42.23	41.55
Bra027819.1-P	Field mustard	plasma membrane	42.23	41.55
AT1G60050.1	Thale cress	plasma membrane	41.69	40.91
CDY65646	Canola	extracellular, plasma membrane	31.88	38.24
Solyc02g087050.2.1	Tomato	plasma membrane	33.79	34.93
CDY11606	Canola	plasma membrane	44.14	34.47
Solyc05g005840.2.1	Tomato	plasma membrane	31.06	33.04
Solyc05g005830.2.1	Tomato	plasma membrane	30.79	32.29
Solyc02g087060.2.1	Tomato	golgi, plasma membrane, vacuole	29.7	29.95
Solyc05g005850.2.1	Tomato	plasma membrane	28.07	29.94
Solyc05g005860.1.1	Tomato	plasma membrane	27.79	27.42

Protein Annotations

MapMan:24.2.1.5	InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	UniProt:K4BR19	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF61	SUPFAM:SSF103481
EnsemblPlantsGene:Solyc04g025750.2	EnsemblPlants:Solyc04g025750.2.1	TMHMM:TMhelix	UniParc:UPI0002765C33	InterPro:WAT1-related	SEG:seg

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4BR19]

Coordinates

chr4:+:21195228..21197642

Molecular Weight (calculated)

40551.8 Da

IEP (calculated)

9.108

GRAVY (calculated)

0.701

Length

367 amino acids

Sequence
(BLAST)

001: MGVKVAIGEM LPCTSMIIIE ACSIFLTIMA STTMSKLGMS SFVFVVYTNA LSFILLIPFS IFFHKNNKIE EPLFTFPLVL RAFFLGLVGV TIAQNLAFVG
101: LSYSSPIVAC GAANMIPAFS FIIAIILRKI RIDLKRQGSI VRVIGSLISI MGILAMTFYK GPVVKQHSPS FLHLATSPHL FIFTSTHENW VLGCFLFVSA
201: SFALVIWNII QVGTSKKHPH VMKITCLYTL FGTIQSALLA LFMEKDVSVW KLKLDMELLV IVLTAIFGSL IRSNVQIWCS RLKGPSYILY FKPVGVPVAS
301: TCGCVLFAAT FHYGSMLSAC ICGLGYYTTL WGQLKEDETM KNKKGNVTTS DERVPLLQEQ QEEGSQV

Best Arabidopsis Sequence Match ( AT1G70260.1 )
(BLAST)

001: MEVKVRRDEL VPFVAMAIME ACTIALTIMA KTALTGGMSP FVFVVYTNAF GSILLLPFSF LFHRNERTEQ SIFSWPLLVR VFFLGFTGIF MFQNLAFVGL
101: RFSSPIVVCA MGLQIPSFSF LLSIILGRSK LDWRNTSTRA KLMGTIVSLS GAFVEELYKG PFIRPASSAS PNRFLKSVPK LLVYYNLPDN WFLGCIFLAV
201: AVFSVSLFNV VQTGTVKKYP HVMKVASFYS IVGTIQCLLF SLFMERDLSA WKIQPNFDLY LIIATGTFGS VIRTSVHVKC TQMKGPYYVP LFKPFGIFWA
301: TLFGTSFFVN SLHYGSVLGA AIAGVGYFTV SWGQLKESEE KQSSNEERKS IKTIHHRDED EYKVPLLINQ EESPV

Arabidopsis Description

WAT1-related protein At1g70260 [Source:UniProtKB/Swiss-Prot;Acc:F4I5D5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.