Factsheet for Solyc05g005860.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
plasma membrane 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane, plastid
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010543	Potato	plasma membrane, plastid	89.52	95.42
VIT_01s0026g00540.t01	Wine grape	golgi, plasma membrane	53.49	55.9
KRH53403	Soybean	plasma membrane	51.34	54.57
Solyc05g005850.2.1	Tomato	plasma membrane	46.51	50.29
Solyc05g005840.2.1	Tomato	plasma membrane	41.67	44.93
Solyc02g087060.2.1	Tomato	golgi, plasma membrane, vacuole	43.55	44.51
Solyc02g087050.2.1	Tomato	plasma membrane	39.78	41.69
Solyc05g005830.2.1	Tomato	plasma membrane	34.14	36.29
Solyc05g005870.2.1	Tomato	plasma membrane	30.38	30.38
Solyc04g025750.2.1	Tomato	plasma membrane	27.42	27.79
Solyc04g025780.1.1	Tomato	extracellular	11.56	27.22

Protein Annotations

MapMan:24.2.1.5	InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	UniProt:K4BWB3	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF36	SUPFAM:SSF103481
EnsemblPlantsGene:Solyc05g005860.1	EnsemblPlants:Solyc05g005860.1.1	TMHMM:TMhelix	UniParc:UPI0002766FFE	InterPro:WAT1-related	SEG:seg

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4BWB3]

Coordinates

chr5:+:665864..671925

Molecular Weight (calculated)

41036.0 Da

IEP (calculated)

9.201

GRAVY (calculated)

0.660

Length

372 amino acids

Sequence
(BLAST)

001: MAAMEMKVKM KEALPYIGMA STQFAQVGLM IVGKKAMSAG MTNFTFVFYS NTLAALILLP SFFFYRSTRP PLNFSLISEF FLLGVLGCSA QLTGYTGINY
101: TSASFASAML NLIPGFTFIL AVIFRMEKLD CRSTSTLIKS IGTIVSIAGA FTATLYKGPQ ILLTSSSKPQ NYLHFQETDW IIGGLYLVVD CVVSSLYLIV
201: QASVLKKYPV ELIVVFFYCF FASILSVTVS LFMDNNSNAW LLQPGTRLFA VLYSGIFGSA FQVSVMFWCI RRKGPLFVAM FHPLGIVIAA ALGIIFLGDI
301: FYLGSLVGSI VIVVGFYAVM WGKTKEDMVD EDKLTRNINS KAPLLEIKDN GRSHSKLTMH IVEVVDMEAT TK

Best Arabidopsis Sequence Match ( AT3G28050.1 )
(BLAST)

001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.