Factsheet for Solyc02g087060.2.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, vacuole

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc03g120880.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G28050.1	Solyc03g120880.2.1	AT3G16310.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69634	Canola	extracellular	16.48	69.77
VIT_14s0066g01650.t01	Wine grape	golgi, plasma membrane, vacuole	63.74	64.44
AT3G28050.1	Thale cress	plasma membrane	63.74	63.22
CDY00140	Canola	golgi, plasma membrane, vacuole	62.36	61.52
Bra033035.1-P	Field mustard	plasma membrane	61.81	61.31
CDY20031	Canola	plasma membrane	62.09	61.25
Bra039062.1-P	Field mustard	extracellular, plasma membrane, vacuole	59.34	61.02
KRG88846	Soybean	plasma membrane	62.09	60.92
CDY04005	Canola	plasma membrane	61.26	60.76
KRH75315	Soybean	plasma membrane	60.71	60.22
Solyc02g087050.2.1	Tomato	plasma membrane	42.86	43.94
Solyc05g005860.1.1	Tomato	plasma membrane	44.51	43.55
Solyc05g005830.2.1	Tomato	plasma membrane	41.48	43.14
Solyc05g005840.2.1	Tomato	plasma membrane	39.56	41.74
Solyc05g005850.2.1	Tomato	plasma membrane	37.36	39.53
Solyc05g005870.2.1	Tomato	plasma membrane	31.32	30.65
Solyc04g025750.2.1	Tomato	plasma membrane	29.95	29.7
Solyc04g025780.1.1	Tomato	extracellular	12.64	29.11

Protein Annotations

MapMan:24.2.1.5	InterPro:EamA_dom	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	UniProt:K4BBL3	PFAM:PF00892	PANTHER:PTHR31218	PANTHER:PTHR31218:SF64	SUPFAM:SSF103481
EnsemblPlantsGene:Solyc02g087060.2	EnsemblPlants:Solyc02g087060.2.1	TMHMM:TMhelix	UniParc:UPI0002767D41	InterPro:WAT1-related	SEG:seg

Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4BBL3]

Coordinates

chr2:+:49590415..49593856

Molecular Weight (calculated)

39770.3 Da

IEP (calculated)

9.640

GRAVY (calculated)

0.539

Length

364 amino acids

Sequence
(BLAST)

001: MGSNNRETTF YKEVLPFAAM VTMECINVGL NTLYKAATNK GMSNHVFVVY SYGLAALLLL PSPFFSTRSR ILPPLNCSIL AKIFLLGVIG CTSQIMGYTG
101: IIYASPTLAS AISNLVPAFT FVLAVIFRME KIQLKRSTTR AKVLGTVVSI AGAFVVTLYK GPKILVPTTA TPNLLRQPLS SSQSNWMLGG LFLTTEYFLV
201: PMWYIVQTWI MKVYPAEVTV VFFYNLTVSI LAAIVGFLSE PDSNKWIIKP DIALASILCS GILGSSLNNT IHTWALRVKG PVYVAMFKPL SIAIAVAMGV
301: ILLGDTLYLG SIVGATVIAI GFYTVMWGKA KEMSEYNDSS DLESSPDQKF PLLHNYKNEG ISNK

Best Arabidopsis Sequence Match ( AT3G28050.1 )
(BLAST)

001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV

Arabidopsis Description

WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.