Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400010539 | Potato | plasma membrane | 93.31 | 92.77 |
| Solyc05g005860.1.1 | Tomato | plasma membrane | 50.29 | 46.51 |
| KRH53403 | Soybean | plasma membrane | 45.93 | 45.14 |
| VIT_01s0026g00540.t01 | Wine grape | golgi, plasma membrane | 46.22 | 44.66 |
| Solyc05g005840.2.1 | Tomato | plasma membrane | 38.66 | 38.55 |
| Solyc02g087060.2.1 | Tomato | golgi, plasma membrane, vacuole | 39.53 | 37.36 |
| Solyc02g087050.2.1 | Tomato | plasma membrane | 37.79 | 36.62 |
| Solyc05g005830.2.1 | Tomato | plasma membrane | 34.59 | 34.0 |
| Solyc05g005870.2.1 | Tomato | plasma membrane | 31.98 | 29.57 |
| Solyc04g025780.1.1 | Tomato | extracellular | 13.08 | 28.48 |
| Solyc04g025750.2.1 | Tomato | plasma membrane | 29.94 | 28.07 |
Protein Annotations
| EnsemblPlants:Solyc05g005850.2.1 | EnsemblPlantsGene:Solyc05g005850.2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 |
| GO:GO:0055085 | InterPro:EamA_dom | InterPro:WAT1-related | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF36 | PFAM:PF00892 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0002766FFD | UniProt:K4BWB2 | MapMan:24.2.1.5 | : |
Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:K4BWB2]
Coordinates
chr5:+:661764..665175
Molecular Weight (calculated)
37789.6 Da
IEP (calculated)
8.825
GRAVY (calculated)
0.859
Length
344 amino acids
Sequence
(BLAST)
(BLAST)
001: MEMSGVVPFI AMIVQQLAQV GLAVVAKGAM STGMTTFTYT FYSSAFSTLL LIPISFFLHR SAIPPLWPTF LYGFFLLGIL GFLMQVLGLL GLQYSSPLLS
101: TAILQLCPGF TFILAVILRM ETFEYKSLST MAKTIGTLVA IIGAFVATLY KGPQVFGINP LNTILTTPSA WAIGGLLTMI CSIIASLFII SQAFVLKKYP
201: AELILMLFYS CCVTILCAVF SLIVERDLNS WSLSPHSRLM AVVYSGLFGN VFQVCIGSWC VRRKGPLFVV MFHPLGIVIA MAASIFMGEI IHVGSLVGSI
301: IIVIGFYSVM WGQSKEWTKK EKNLRSNNNK IPFLQDKNDD DPEV
101: TAILQLCPGF TFILAVILRM ETFEYKSLST MAKTIGTLVA IIGAFVATLY KGPQVFGINP LNTILTTPSA WAIGGLLTMI CSIIASLFII SQAFVLKKYP
201: AELILMLFYS CCVTILCAVF SLIVERDLNS WSLSPHSRLM AVVYSGLFGN VFQVCIGSWC VRRKGPLFVV MFHPLGIVIA MAASIFMGEI IHVGSLVGSI
301: IIVIGFYSVM WGQSKEWTKK EKNLRSNNNK IPFLQDKNDD DPEV
001: MREAGEEKVA WKYFTRDVVP FAAMFAVECA TVGSNTLFKA ATLRGLSFYV FVFYSYIVST LLLLPLSVIF GRSRRLPAAK SPLFFKIFLL GLVGFMSQIA
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS
101: GCKGIAYSSP TLASAISNLT PAFTFTLAVI FRMEQVRLRS SATQAKIIGA ILSISGALVV VLYKGPQVLA SASFTTVLPT VTLHQQLTSI ESSWIIGGLL
201: LASQYFLISV WYILQTRVME VYPEEITVVF FYNLFATLIS VPVCLFAESN LTSWVLKPDI SLAAIIYSGV FVSLFSALTH TWGLHLKGPV YISLFRPLSI
301: AIAVAMGAIF LGDALHLGSV IGSMILCIGF YTVIWGKARE DTIKTVAGSE QSPLLLTHII EDGAFPLS
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:F4KHA9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.