Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 4
- extracellular 3
- plasma membrane 5
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G28050.1 | KRH09922 | AT3G16310.1 | 21798944 |
| AT3G28050.1 | KRH23409 | AT3G16310.1 | 21798944 |
| AT3G28050.1 | KRH65384 | AT3G60600.1 | 21798944 |
| AT3G28050.1 | KRH76164 | AT3G60600.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG88846 | Soybean | plasma membrane | 95.91 | 94.88 |
| Solyc02g087060.2.1 | Tomato | golgi, plasma membrane, vacuole | 60.22 | 60.71 |
| KRG93364 | Soybean | plasma membrane | 60.76 | 59.79 |
| KRH18613 | Soybean | plasma membrane | 60.49 | 59.52 |
| KRG93361 | Soybean | plasma membrane | 57.77 | 57.92 |
| AT3G28050.1 | Thale cress | plasma membrane | 57.49 | 57.49 |
| Bra033035.1-P | Field mustard | plasma membrane | 56.68 | 56.68 |
| CDY04005 | Canola | plasma membrane | 56.68 | 56.68 |
| CDY00140 | Canola | golgi, plasma membrane, vacuole | 56.95 | 56.64 |
| CDY20031 | Canola | plasma membrane | 56.68 | 56.37 |
| Bra039062.1-P | Field mustard | extracellular, plasma membrane, vacuole | 53.95 | 55.93 |
| CDY69634 | Canola | extracellular | 12.81 | 54.65 |
| KRG93356 | Soybean | plasma membrane | 48.5 | 54.1 |
| KRH46524 | Soybean | plasma membrane | 47.96 | 47.96 |
| KRH13199 | Soybean | endoplasmic reticulum, extracellular, plastid | 15.53 | 47.11 |
| KRH63359 | Soybean | extracellular, plasma membrane, vacuole | 10.35 | 44.19 |
| KRH69519 | Soybean | golgi, plasma membrane, vacuole | 41.69 | 43.84 |
| KRH53403 | Soybean | plasma membrane | 39.51 | 41.43 |
| KRH64529 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 39.51 | 41.43 |
| KRH74641 | Soybean | plasma membrane | 17.71 | 40.62 |
| KRH74638 | Soybean | golgi, plasma membrane, plastid | 38.69 | 40.23 |
| KRH03335 | Soybean | plasma membrane | 27.25 | 40.0 |
| KRH69515 | Soybean | golgi, plasma membrane, plastid | 38.69 | 40.0 |
| KRH74643 | Soybean | plasma membrane | 37.6 | 39.77 |
| KRH26178 | Soybean | plasma membrane | 18.53 | 39.53 |
| KRH03336 | Soybean | endoplasmic reticulum, plasma membrane | 39.78 | 39.35 |
| KRH69514 | Soybean | plasma membrane | 37.6 | 39.32 |
| KRH53406 | Soybean | golgi, plasma membrane, vacuole | 36.51 | 38.29 |
| KRH57038 | Soybean | extracellular, golgi, mitochondrion, plastid | 22.89 | 38.18 |
| KRH74640 | Soybean | plasma membrane | 19.89 | 38.02 |
| KRH64531 | Soybean | golgi, plasma membrane, vacuole | 35.97 | 37.61 |
| KRH74642 | Soybean | plasma membrane | 27.52 | 37.41 |
| KRH00038 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 33.52 | 36.94 |
| KRH57037 | Soybean | plasma membrane | 36.78 | 35.81 |
| KRG90314 | Soybean | extracellular, plasma membrane, vacuole | 8.72 | 34.78 |
| KRH15684 | Soybean | extracellular, plasma membrane, vacuole | 8.72 | 34.78 |
| KRH04697 | Soybean | plasma membrane, vacuole | 25.61 | 34.43 |
| KRH54612 | Soybean | extracellular, plasma membrane, vacuole | 8.45 | 33.7 |
| KRH53400 | Soybean | plasma membrane | 32.43 | 33.06 |
| KRH71873 | Soybean | extracellular, plasma membrane, vacuole | 8.17 | 32.61 |
| KRH53402 | Soybean | extracellular, plasma membrane | 32.15 | 32.42 |
| KRH37955 | Soybean | cytosol, nucleus, peroxisome | 16.35 | 31.91 |
Protein Annotations
| EntrezGene:100801438 | MapMan:24.2.1.5 | UniProt:A0A0R0LDT4 | EMBL:ACUP02000294 | InterPro:EamA_dom | EnsemblPlantsGene:GLYMA_01G077700 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlants:KRH75315 |
| ProteinID:KRH75315 | ProteinID:KRH75315.1 | PFAM:PF00892 | PANTHER:PTHR31218 | PANTHER:PTHR31218:SF64 | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0002336FBE | InterPro:WAT1-related | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:+:19513501..19516033
Molecular Weight (calculated)
39555.4 Da
IEP (calculated)
9.113
GRAVY (calculated)
0.785
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKRVLYKDL VPFGAMVATE CLNVALNTLF KAATLRGMSY HVFVVYAYAV AAIVLIPAPF ISQRSRVLPP LSFPLLRKIG LLGLIGCASQ IVGYTGINFS
101: SPTLSSAISN LVPAFTFLLA IIFRMEKVIV RNTSCQAKVL GTIVSITGAF VVTLYKGPPI IIVHTPSLSL HQPINTLNLV DPSWAIGGLL LTAEYILVPL
201: WYIVQVQIMK VYPNELIVIF FYNLCVSIMA AIVAIFTETN AGAWKIGVDT ALASIVCSGI FGSFVNNVVH TWVLRIKGPV YVAMFKPLSI AIAVALGVMF
301: LGDTLHLGSI VGATIISIGF YTVMWGKATE ENVGEDVPGQ QSPTTENVPL LQSCKTDTAE KKMHGSV
101: SPTLSSAISN LVPAFTFLLA IIFRMEKVIV RNTSCQAKVL GTIVSITGAF VVTLYKGPPI IIVHTPSLSL HQPINTLNLV DPSWAIGGLL LTAEYILVPL
201: WYIVQVQIMK VYPNELIVIF FYNLCVSIMA AIVAIFTETN AGAWKIGVDT ALASIVCSGI FGSFVNNVVH TWVLRIKGPV YVAMFKPLSI AIAVALGVMF
301: LGDTLHLGSI VGATIISIGF YTVMWGKATE ENVGEDVPGQ QSPTTENVPL LQSCKTDTAE KKMHGSV
001: MARKYFQREV LPVTALVIME CANVGLNTLF KAATLKGMSF HVFIVYSYGL AALLLLPSLF CSFRSRTLPP MNFSILYKIV LLGIIGCCSN IMGYTGINYS
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV
101: SPTLASAISN LTPAFTFLLA VVFRMESVSF KRTSSVAKML GTVVSIGGAF IVTLYNGPVV IAKSPPSVSL RSQSTNPNWI LGAGFLAVEY FCVPLWYIVQ
201: TQIMREYPAE FTVVCFYSIG VSFWTALVTL FTEGNDLGAW KIKPNIALVS IVCSGLFGSC INNTIHTWAL RIKGPLFVAM FKPLSIAIAV AMGVIFLRDS
301: LYIGSLIGAT VITIGFYTVM WGKAKEVALV EDDNKANHEE ANEADLDSPS GSQKAPLLES YKNDEHV
Arabidopsis Description
WAT1-related protein [Source:UniProtKB/TrEMBL;Acc:A0A178VL75]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.